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Aliases for ANTXRLP1 Gene

Aliases for ANTXRLP1 Gene

  • Anthrax Toxin Receptor-Like Pseudogene 1 2 3 5

External Ids for ANTXRLP1 Gene

Previous GeneCards Identifiers for ANTXRLP1 Gene

  • GC10M047621

Summaries for ANTXRLP1 Gene

GeneCards Summary for ANTXRLP1 Gene

ANTXRLP1 (Anthrax Toxin Receptor-Like Pseudogene 1) is a Pseudogene.

Additional gene information for ANTXRLP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANTXRLP1 Gene

Genomics for ANTXRLP1 Gene

GeneHancer (GH) Regulatory Elements for ANTXRLP1 Gene

Promoters and enhancers for ANTXRLP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I046271 Enhancer 0.2 dbSUPER 572.1 +1.0 1017 1.3 ANTXRLP1 PIR53286
GH10I046265 Enhancer 1.2 Ensembl ENCODE dbSUPER 22.2 +4.9 4905 5.4 HDGF PKNOX1 ZNF473 ZSCAN4 TCF12 EGR1 ATF7 BCLAF1 IKZF2 RUNX3 ANTXRLP1 AGAP10P ZFAND4 AGAP4 ANTXRL ANXA8L1 PIR53286
GH10I046282 Enhancer 1.4 Ensembl ENCODE dbSUPER 14.4 -10.4 -10444 3.2 ATF1 SIN3A ZNF2 GLIS2 E2F8 KLF7 ATF7 RUNX3 ZNF202 SP3 GC10P046284 LOC105378577 PARGP1 BMS1P1 WASHC2C ANTXRLP1 AGAP4 AGAP10P ANTXRL HNRNPA1P33
GH10I046255 Enhancer 0.8 Ensembl ENCODE 0.4 +17.4 17352 0.8 CTCF ZNF654 REST RAD21 NR2F2 ZNF335 KLF16 IKZF1 SMC3 ZNF600 ANTXRL PIR53286 ANTXRLP1
GH10I046228 Enhancer 0.8 ENCODE 0.3 +44.6 44597 0.2 CTCF PKNOX1 KLF17 SIN3A ZNF2 ZNF48 RAD21 ZNF335 CC2D1A ARID2 AHCYP1 PIR53286 ANTXRLP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ANTXRLP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ANTXRLP1 Gene

Genomic Locations for ANTXRLP1 Gene
chr10:46,219,025-46,273,557
(GRCh38/hg38)
Size:
54,533 bases
Orientation:
Minus strand
chr10:47,605,211-47,644,793
(GRCh37/hg19)

Genomic View for ANTXRLP1 Gene

Genes around ANTXRLP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANTXRLP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANTXRLP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANTXRLP1 Gene

Proteins for ANTXRLP1 Gene

Post-translational modifications for ANTXRLP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANTXRLP1 Gene

Domains & Families for ANTXRLP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANTXRLP1 Gene

Function for ANTXRLP1 Gene

Phenotypes From GWAS Catalog for ANTXRLP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANTXRLP1 Gene

Localization for ANTXRLP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANTXRLP1 Gene

Pathways & Interactions for ANTXRLP1 Gene

SuperPathways for ANTXRLP1 Gene

No Data Available

Interacting Proteins for ANTXRLP1 Gene

Gene Ontology (GO) - Biological Process for ANTXRLP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANTXRLP1 Gene

Drugs & Compounds for ANTXRLP1 Gene

No Compound Related Data Available

Transcripts for ANTXRLP1 Gene

mRNA/cDNA for ANTXRLP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ANTXRLP1 Gene

No ASD Table

Relevant External Links for ANTXRLP1 Gene

GeneLoc Exon Structure for
ANTXRLP1
ECgene alternative splicing isoforms for
ANTXRLP1

Expression for ANTXRLP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ANTXRLP1 Gene

mRNA differential expression in normal tissues according to GTEx for ANTXRLP1 Gene

This gene is overexpressed in Testis (x21.4), Whole Blood (x6.8), Spleen (x5.7), and Small Intestine - Terminal Ileum (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of ANTXRLP1 Gene:

ANTXRLP1
genes like me logo Genes that share expression patterns with ANTXRLP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANTXRLP1 Gene

Orthologs for ANTXRLP1 Gene

Evolution for ANTXRLP1 Gene

ENSEMBL:
Gene Tree for ANTXRLP1 (if available)
TreeFam:
Gene Tree for ANTXRLP1 (if available)

No data available for Orthologs for ANTXRLP1 Gene

Paralogs for ANTXRLP1 Gene

No data available for Paralogs for ANTXRLP1 Gene

Variants for ANTXRLP1 Gene

Sequence variations from dbSNP and Humsavar for ANTXRLP1 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000996003 -- 46,226,402(-) G/A intron_variant
rs1001343325 -- 46,226,160(-) G/T intron_variant
rs1001514793 -- 46,243,483(-) A/G intron_variant
rs1001619574 -- 46,230,498(-) T/C intron_variant
rs1002007464 -- 46,229,494(-) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ANTXRLP1 Gene

Variant ID Type Subtype PubMed ID
dgv1107n54 CNV loss 21841781
dgv1108n54 CNV loss 21841781
dgv1109n54 CNV gain 21841781
dgv1110n54 CNV gain 21841781
dgv1111n54 CNV gain+loss 21841781
dgv1112n54 CNV gain+loss 21841781
dgv1113n54 CNV loss 21841781
dgv1114n54 CNV loss 21841781
dgv1115n54 CNV gain 21841781
dgv1116n54 CNV gain 21841781
dgv1117n54 CNV loss 21841781
dgv120e214 CNV gain 21293372
dgv121e214 CNV gain 21293372
dgv229e212 CNV loss 25503493
dgv27e55 CNV gain 17911159
dgv28e55 CNV gain 17911159
dgv32n111 CNV duplication 26073780
dgv81n27 CNV loss 19166990
dgv82n27 CNV gain 19166990
dgv830n100 CNV gain 25217958
dgv831n100 CNV loss 25217958
dgv832n100 CNV gain+loss 25217958
dgv833n100 CNV gain 25217958
dgv834n100 CNV loss 25217958
dgv835n100 CNV gain 25217958
dgv836n100 CNV gain+loss 25217958
dgv837n100 CNV gain 25217958
dgv83n27 CNV loss 19166990
dgv840n100 CNV gain 25217958
dgv841n100 CNV gain 25217958
dgv842n100 CNV gain 25217958
dgv843n100 CNV gain 25217958
dgv844n100 CNV gain 25217958
dgv84n27 CNV loss 19166990
dgv85n27 CNV gain 19166990
dgv86n27 CNV loss 19166990
dgv87n27 CNV gain 19166990
dgv88n27 CNV gain 19166990
dgv89n27 CNV loss 19166990
esv2421526 OTHER complex 20811451
esv2475335 OTHER inversion 19546169
esv2736152 CNV deletion 23290073
esv2750959 CNV loss 17911159
esv28391 CNV loss 19812545
esv3327825 CNV duplication 20981092
esv3329341 CNV duplication 20981092
esv3350669 CNV duplication 20981092
esv3368232 CNV duplication 20981092
esv3368270 CNV duplication 20981092
esv3374054 CNV duplication 20981092
esv3388409 CNV duplication 20981092
esv3578854 CNV loss 25503493
esv3584554 CNV gain 24956385
esv3623125 CNV loss 21293372
esv3623128 CNV loss 21293372
esv3623132 CNV loss 21293372
esv3891800 CNV gain+loss 25118596
esv3891801 CNV gain+loss 25118596
esv3891802 CNV gain 25118596
esv5777 OTHER inversion 19470904
nsv1038567 CNV gain 25217958
nsv1039518 CNV loss 25217958
nsv1045400 CNV loss 25217958
nsv1118477 CNV duplication 24896259
nsv1145763 CNV duplication 26484159
nsv1152063 CNV duplication 26484159
nsv437671 CNV loss 16327808
nsv442574 CNV gain+loss 18776908
nsv469676 CNV gain+loss 16826518
nsv470935 CNV loss 18288195
nsv471667 CNV gain 15918152
nsv550732 CNV gain 21841781
nsv550758 CNV loss 21841781
nsv550769 CNV loss 21841781
nsv550775 CNV gain 21841781
nsv550787 CNV loss 21841781
nsv550789 CNV loss 21841781
nsv550794 CNV gain 21841781
nsv550795 CNV gain 21841781
nsv818759 CNV loss 17921354
nsv818760 CNV gain 17921354
nsv820578 CNV duplication 20802225
nsv825370 CNV loss 20364138
nsv831855 CNV gain 17160897
nsv831856 CNV gain 17160897
nsv831857 CNV gain 17160897
nsv831859 CNV gain+loss 17160897
nsv947944 CNV duplication 23825009
nsv947945 CNV duplication 23825009
nsv947946 CNV duplication 23825009
nsv947947 CNV duplication 23825009
nsv951581 CNV deletion 24416366
nsv951582 CNV deletion 24416366
nsv975798 CNV duplication 23825009

Additional Variant Information for ANTXRLP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANTXRLP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANTXRLP1 Gene

Disorders for ANTXRLP1 Gene

Additional Disease Information for ANTXRLP1

No disorders were found for ANTXRLP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANTXRLP1 Gene

Publications for ANTXRLP1 Gene

  1. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2000) 3 58

Products for ANTXRLP1 Gene

Sources for ANTXRLP1 Gene

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