Aliases for ANKRD36BP2 Gene

Aliases for ANKRD36BP2 Gene

  • Ankyrin Repeat Domain 36B Pseudogene 2 2 3 5
  • ANKRD36BP2 5

External Ids for ANKRD36BP2 Gene

Previous GeneCards Identifiers for ANKRD36BP2 Gene

  • GC02P087984
  • GC02P089068
  • GC02P089069

Summaries for ANKRD36BP2 Gene

GeneCards Summary for ANKRD36BP2 Gene

ANKRD36BP2 (Ankyrin Repeat Domain 36B Pseudogene 2) is a Pseudogene.

Additional gene information for ANKRD36BP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ANKRD36BP2 Gene

Genomics for ANKRD36BP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ANKRD36BP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J088765 Promoter/Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas 611.8 +0.3 294 3 ZBTB33 KDM1A EZH2 GTF2F1 POLR2A ZNF561 CTBP1 USF1 KLF4 ZNF217 ANKRD36BP2 lnc-RPIA-1 piR-55567-002 piR-49483 RPIA IGK
GH02J088690 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 20.8 -74.1 -74106 3.4 CEBPG SP1 CREB1 GATAD2A CTCF HNRNPL ATF7 TEAD4 PRDM10 REST RPIA ENSG00000287686 LOC102724805 ANKRD36BP2 TEX37 EIF2AK3 piR-40441-007 IGK
GH02J088831 Enhancer 1 Ensembl ENCODE dbSUPER 18.4 +66.6 66552 2.3 CTCF POLR2A REST RAD21 TRIM22 RELA ZNF316 MAFF SMC3 MAFK IGKDEL ANKRD36BP2 LOC105374854 IGK RPIA ENSG00000240040
GH02J088751 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -11.9 -11907 5.8 RFX1 IKZF1 POLR2A PKNOX1 HDAC1 SOX6 SCRT2 CTBP1 HDAC2 CEBPB RPIA ANKRD36BP2 EIF2AK3-DT EIF2AK3 lnc-RPIA-1 NONHSAG028463.2 IGK
GH02J088735 Enhancer 1.1 Ensembl ENCODE dbSUPER 11.7 -28.5 -28506 6.6 CTCF JUND PKNOX1 REST RAD21 TRIM22 YY1 RELA EGR1 CTBP1 NONHSAG028463.2 ANKRD36BP2 RPIA LOC105374853 IGK
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ANKRD36BP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ANKRD36BP2 Gene

Genomic Locations for ANKRD36BP2 Gene
chr2:88,765,807-88,806,612
(GRCh38/hg38)
Size:
40,806 bases
Orientation:
Plus strand
chr2:89,065,324-89,106,126
(GRCh37/hg19)
Size:
40,803 bases
Orientation:
Plus strand

Genomic View for ANKRD36BP2 Gene

Genes around ANKRD36BP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD36BP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD36BP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD36BP2 Gene

Proteins for ANKRD36BP2 Gene

Post-translational modifications for ANKRD36BP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD36BP2 Gene

Domains & Families for ANKRD36BP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ANKRD36BP2 Gene

Function for ANKRD36BP2 Gene

Phenotypes From GWAS Catalog for ANKRD36BP2 Gene

genes like me logo Genes that share phenotypes with ANKRD36BP2: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD36BP2 Gene

Localization for ANKRD36BP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD36BP2 Gene

Pathways & Interactions for ANKRD36BP2 Gene

PathCards logo

SuperPathways for ANKRD36BP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANKRD36BP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ANKRD36BP2 Gene

Drugs & Compounds for ANKRD36BP2 Gene

No Compound Related Data Available

Transcripts for ANKRD36BP2 Gene

mRNA/cDNA for ANKRD36BP2 Gene

5 NCBI additional mRNA sequence :
7 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD36BP2 Gene

No ASD Table

Relevant External Links for ANKRD36BP2 Gene

GeneLoc Exon Structure for
ANKRD36BP2

Expression for ANKRD36BP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ANKRD36BP2 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD36BP2 Gene

This gene is overexpressed in Testis (x6.7), Minor Salivary Gland (x4.9), Spleen (x4.5), and Colon - Transverse (x4.0).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ANKRD36BP2

SOURCE GeneReport for Unigene cluster for ANKRD36BP2 Gene:

Hs.105323
genes like me logo Genes that share expression patterns with ANKRD36BP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD36BP2 Gene

Orthologs for ANKRD36BP2 Gene

Evolution for ANKRD36BP2 Gene

ENSEMBL:
Gene Tree for ANKRD36BP2 (if available)
TreeFam:
Gene Tree for ANKRD36BP2 (if available)

No data available for Orthologs for ANKRD36BP2 Gene

Paralogs for ANKRD36BP2 Gene

No data available for Paralogs for ANKRD36BP2 Gene

Variants for ANKRD36BP2 Gene

Structural Variations from Database of Genomic Variants (DGV) for ANKRD36BP2 Gene

Variant ID Type Subtype PubMed ID
dgv1951n106 CNV deletion 24896259
dgv1952n106 CNV deletion 24896259
dgv61n16 CNV deletion 17901297
dgv6947n54 CNV gain 21841781
esv2058004 CNV deletion 18987734
esv2169739 CNV deletion 18987734
esv26298 CNV gain 19812545
esv3559791 CNV deletion 23714750
esv3591596 CNV loss 21293372
nsv1072005 CNV deletion 25765185
nsv1077353 CNV duplication 25765185
nsv1109271 CNV deletion 24896259
nsv1110340 CNV duplication 24896259
nsv1114104 CNV deletion 24896259
nsv1114106 CNV deletion 24896259
nsv1118629 CNV duplication 24896259
nsv1123347 CNV deletion 24896259
nsv1124795 CNV duplication 24896259
nsv1128792 CNV duplication 24896259
nsv1130752 CNV deletion 24896259
nsv1134883 CNV deletion 24896259
nsv1138798 CNV deletion 24896259
nsv1138799 CNV deletion 24896259
nsv1147356 CNV duplication 26484159
nsv1148100 CNV duplication 26484159
nsv1148611 CNV deletion 26484159
nsv1153524 CNV duplication 26484159
nsv190 CNV deletion 15895083
nsv213270 CNV deletion 16902084
nsv2824 CNV deletion 18451855
nsv470476 CNV gain 18288195
nsv508152 CNV deletion 20534489
nsv582384 CNV loss 21841781
nsv582386 CNV loss 21841781
nsv7318 OTHER inversion 18451855
nsv834290 CNV loss 17160897
nsv955228 CNV deletion 24416366
nsv955229 CNV duplication 24416366
nsv956665 CNV deletion 24416366
nsv979041 CNV duplication 23825009

Additional Variant Information for ANKRD36BP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD36BP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for ANKRD36BP2 Gene

Disorders for ANKRD36BP2 Gene

Additional Disease Information for ANKRD36BP2

No disorders were found for ANKRD36BP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD36BP2 Gene

Publications for ANKRD36BP2 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for ANKRD36BP2 Gene

Sources for ANKRD36BP2 Gene