Aliases for ANKRD36BP1 Gene
Subcategory (RNA class) for ANKRD36BP1 Gene
lncRNA
Aliases for ANKRD36BP1 Gene
External Ids for ANKRD36BP1 Gene
- HGNC: 28169
- Entrez Gene: 84832
- Ensembl: ENSG00000214262
- UniProtKB: Q96IX9
ORGUL Members for ANKRD36BP1 Gene
Previous HGNC Symbols for ANKRD36BP1 Gene
- ANKRD26L1
- ANKRD36BL1
Previous GeneCards Identifiers for ANKRD36BP1 Gene
- GC01M139458
Summaries for ANKRD36BP1 Gene
GeneCards Summary for ANKRD36BP1 Gene
ANKRD36BP1 (Ankyrin Repeat Domain 36B Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.
Additional gene information for ANKRD36BP1 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD36BP1 Gene
Genomics for ANKRD36BP1 Gene
Regulatory Element Products
Genomic Locations for ANKRD36BP1 Gene
Genomic Locations for ANKRD36BP1 Gene
- chr1:168,245,565-168,247,430
- (GRCh38/hg38)
- Size:
- 1,866 bases
- Orientation:
- Minus strand
- chr1:168,214,803-168,216,668
- (GRCh37/hg19)
Genomic View for ANKRD36BP1 Gene
Genes around ANKRD36BP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1q24.2 by Entrez Gene
- 1q24.2 by HGNC
- 1q24.2 by Ensembl
ANKRD36BP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ANKRD36BP1 Gene
No data available for GeneHancer (GH) Regulatory Elements for ANKRD36BP1 Gene
Proteins for ANKRD36BP1 Gene
-
Protein details for ANKRD36BP1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q96IX9-A26L1_HUMAN
- Recommended name:
- Putative ankyrin repeat domain-containing protein 26-like 1
- Protein Accession:
- Q96IX9
Protein attributes for ANKRD36BP1 Gene
- Size:
- 119 amino acids
- Molecular mass:
- 14172 Da
- Quaternary structure:
- No Data Available
Protein Expression for ANKRD36BP1 Gene
Post-translational modifications for ANKRD36BP1 Gene
No Post-translational modifications
Protein Products
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Assay Products
No data available for DME Specific Peptides for ANKRD36BP1 Gene
Domains & Families for ANKRD36BP1 Gene
Protein Domains for ANKRD36BP1 Gene
- ProtoNet:
Suggested Antigen Peptide Sequences for ANKRD36BP1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families and UniProtKB/Swiss-Prot for ANKRD36BP1 Gene
Function for ANKRD36BP1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005515 | protein binding | IPI | 16189514 |
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-
CRISPR Products
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miRNA for ANKRD36BP1 Gene
- miRTarBase miRNAs that target ANKRD36BP1
miRNA Products
Inhibitory RNA Products
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Clone Products
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- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available ANKRD36BP1 gene related products
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-
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No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ANKRD36BP1 Gene
Localization for ANKRD36BP1 Gene
| Compartment | Confidence |
|---|---|
| nucleus | 3 |
| cytosol | 3 |
| plasma membrane | 2 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD36BP1 Gene
Transcripts for ANKRD36BP1 Gene
mRNA/cDNA for ANKRD36BP1 Gene
- (2) Additional mRNA sequences :
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000358576 1779 bps
- ENST00000604892 1417 bps
Unigene Clusters for ANKRD36BP1 Gene
CRISPR Products
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Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
Inhibitory RNA Products
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- genomics-online: shRNA clones - Search results for available ANKRD36BP1 gene related products
Clone Products
- GenScript: Custom all cDNA clones Services for ANKRD36BP1
- VectorBuilder custom plasmid, inducible vectors for ANKRD36BP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ANKRD36BP1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available ANKRD36BP1 gene related products
- orf clones - Search results for available ANKRD36BP1 gene related products
- Applied Biological Materials Clones for ANKRD36BP1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Relevant External Links for ANKRD36BP1 Gene
- GeneLoc Exon Structure for
- ANKRD36BP1
- ECgene alternative splicing isoforms for
- ANKRD36BP1
Expression for ANKRD36BP1 Gene
This gene is overexpressed in Plasma (69.0).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ANKRD36BP1 Gene
- Elite partner
NURSA nuclear receptor signaling pathways regulating expression of ANKRD36BP1 Gene:
ANKRD36BP1SOURCE GeneReport for Unigene cluster for ANKRD36BP1 Gene:
Hs.537067Primer Products
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Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD36BP1 Gene
Orthologs for ANKRD36BP1 Gene
No data available for Orthologs for ANKRD36BP1 Gene
Paralogs for ANKRD36BP1 Gene
(26) SIMAP similar genes for ANKRD36BP1 Gene using alignment to 1 proteins:
- A26L1_HUMAN
No data available for Paralogs for ANKRD36BP1 Gene
Variants for ANKRD36BP1 Gene
| SNP ID | Clin | Chr 01 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000756823 | -- | 168,248,720(-) | G/C | upstream_transcript_variant | |
| rs1000853216 | -- | 168,246,446(-) | G/A | non_coding_transcript_variant | |
| rs1001824305 | -- | 168,247,724(-) | G/A | upstream_transcript_variant | |
| rs1001876654 | -- | 168,248,104(-) | C/G | upstream_transcript_variant | |
| rs1001938146 | -- | 168,249,380(-) | C/G | upstream_transcript_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| nsv1002007 | CNV | gain | 25217958 |
| nsv1078878 | OTHER | inversion | 25765185 |
| nsv831825 | CNV | gain+loss | 17160897 |
| nsv946490 | CNV | duplication | 23825009 |
Additional Variant Information for ANKRD36BP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ANKRD36BP1
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANKRD36BP1 Gene
Disorders for ANKRD36BP1 Gene
Additional Disease Information for ANKRD36BP1
No disorders were found for ANKRD36BP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD36BP1 Gene
Publications for ANKRD36BP1 Gene
- A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3 58
- Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) Oláh J … Ovádi J (The Journal of biological chemistry 2011) 3 58
- The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 4 58
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
- Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual JF … Vidal M (Nature 2005) 3 58
Products for ANKRD36BP1 Gene
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- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- antibodies-online: Search results for available ANKRD36BP1 related products ranked by validation data
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Sources for ANKRD36BP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
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- (119) Disease Ontology
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- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio