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Aliases for ANKRD34C-AS1 Gene

Subcategory (RNA class) for ANKRD34C-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ANKRD34C-AS1 Gene

  • ANKRD34C Antisense RNA 1 2 3 5

External Ids for ANKRD34C-AS1 Gene

Summaries for ANKRD34C-AS1 Gene

GeneCards Summary for ANKRD34C-AS1 Gene

ANKRD34C-AS1 (ANKRD34C Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ANKRD34C-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD34C-AS1 Gene

Genomics for ANKRD34C-AS1 Gene

GeneHancer (GH) Regulatory Elements for ANKRD34C-AS1 Gene

Promoters and enhancers for ANKRD34C-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J079243 Enhancer 0.4 ENCODE 0.3 +40.0 40011 0.2 RFX1 POLR2A GC15P079237 GC15M079279 ANKRD34C-AS1
GH15J079192 Enhancer 0.6 ENCODE dbSUPER 0.2 +91.1 91082 1 USF1 ZFX RASGRF1 ENSG00000177699 GC15P079181 GC15P079204 ANKRD34C-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ANKRD34C-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ANKRD34C-AS1 Gene

Genomic Locations for ANKRD34C-AS1 Gene
chr15:79,191,707-79,283,945
(GRCh38/hg38)
Size:
92,239 bases
Orientation:
Minus strand
chr15:79,484,049-79,576,287
(GRCh37/hg19)
Size:
92,239 bases
Orientation:
Minus strand

Genomic View for ANKRD34C-AS1 Gene

Genes around ANKRD34C-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD34C-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD34C-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD34C-AS1 Gene

Proteins for ANKRD34C-AS1 Gene

Post-translational modifications for ANKRD34C-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD34C-AS1 Gene

Domains & Families for ANKRD34C-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANKRD34C-AS1 Gene

Function for ANKRD34C-AS1 Gene

Phenotypes From GWAS Catalog for ANKRD34C-AS1 Gene

Phenotypes for ANKRD34C-AS1 Gene

genes like me logo Genes that share phenotypes with ANKRD34C-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD34C-AS1 Gene

Localization for ANKRD34C-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD34C-AS1 Gene

Pathways & Interactions for ANKRD34C-AS1 Gene

SuperPathways for ANKRD34C-AS1 Gene

No Data Available

Interacting Proteins for ANKRD34C-AS1 Gene

Gene Ontology (GO) - Biological Process for ANKRD34C-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD34C-AS1 Gene

Drugs & Compounds for ANKRD34C-AS1 Gene

No Compound Related Data Available

Transcripts for ANKRD34C-AS1 Gene

mRNA/cDNA for ANKRD34C-AS1 Gene

(8) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(9) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD34C-AS1 Gene

No ASD Table

Relevant External Links for ANKRD34C-AS1 Gene

GeneLoc Exon Structure for
ANKRD34C-AS1
ECgene alternative splicing isoforms for
ANKRD34C-AS1

Expression for ANKRD34C-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ANKRD34C-AS1 Gene

genes like me logo Genes that share expression patterns with ANKRD34C-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD34C-AS1 Gene

Orthologs for ANKRD34C-AS1 Gene

Evolution for ANKRD34C-AS1 Gene

ENSEMBL:
Gene Tree for ANKRD34C-AS1 (if available)
TreeFam:
Gene Tree for ANKRD34C-AS1 (if available)

No data available for Orthologs for ANKRD34C-AS1 Gene

Paralogs for ANKRD34C-AS1 Gene

No data available for Paralogs for ANKRD34C-AS1 Gene

Variants for ANKRD34C-AS1 Gene

Sequence variations from dbSNP and Humsavar for ANKRD34C-AS1 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000060083 -- 79,209,697(-) A/G intron_variant
rs1000080772 -- 79,210,224(-) A/C intron_variant
rs1000117323 -- 79,221,436(-) G/A intron_variant
rs1000157720 -- 79,205,874(-) C/A intron_variant
rs1000215928 -- 79,209,952(-) G/A intron_variant

Additional Variant Information for ANKRD34C-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD34C-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ANKRD34C-AS1 Gene

Disorders for ANKRD34C-AS1 Gene

Additional Disease Information for ANKRD34C-AS1

No disorders were found for ANKRD34C-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD34C-AS1 Gene

Publications for ANKRD34C-AS1 Gene

  1. Heritability and genetic association analysis of cognition in the Diabetes Heart Study. (PMID: 24684796) Cox AJ … Bowden DW (Neurobiology of aging 2014) 3 58
  2. Loci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers. (PMID: 23382691) Lauc G … Rudan I (PLoS genetics 2013) 3 58
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for ANKRD34C-AS1 Gene

Sources for ANKRD34C-AS1 Gene

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