Aliases for ANKRD33B-AS1 Gene

Subcategory (RNA class) for ANKRD33B-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ANKRD33B-AS1 Gene

  • ANKRD33B Antisense RNA 1 2 3 5
  • ANKRD33B-AS1 2 5 165
  • ANKRD33B Antisense RNA 1 (Non-Protein Coding) 2 3
  • NONHSAG039896.2 91
  • HSALNG0040165 164

External Ids for ANKRD33B-AS1 Gene

Previous GeneCards Identifiers for ANKRD33B-AS1 Gene

  • GC00U932989

Summaries for ANKRD33B-AS1 Gene

GeneCards Summary for ANKRD33B-AS1 Gene

ANKRD33B-AS1 (ANKRD33B Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ANKRD33B-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ANKRD33B-AS1 Gene

Genomics for ANKRD33B-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ANKRD33B-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J010626 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE CraniofacialAtlas 600.7 +0.6 609 2 CREB1 CTCF ATF7 TEAD4 PRDM10 REST ZNF629 RFX1 LEF1 IKZF1 ANKRD33B-AS1 ANKRD33B LINC02213 LINC01513 piR-43105-512 DAP
GH05J010627 Enhancer 0.4 ENCODE 600.7 +1.8 1841 0.2 SMARCC2 POLR2A MYC MAX ANKRD33B-AS1 piR-43105-512 ANKRD33B LINC02213 LINC01513 DAP
GH05J010562 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE CraniofacialAtlas 11.3 +62.8 62794 6.3 RNF2 ARHGAP35 SP1 PRDM10 ZNF692 POLR2A BACH1 LARP7 STAT3 PRDM1 ANKRD33B lnc-DAP-11 ANKRD33B-AS1 ROPN1L ROPN1L-AS1 MARCHF6 RF00017-4503 DAP
GH05J010504 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 11.6 +124.1 124125 5.4 GATAD2A CTCF PRDM10 ZNF629 ZNF512 LEF1 IKZF1 ZNF692 JUND MTA2 LINC02212 ANKRD33B LINC01513 ANKRD33B-AS1 piR-42491-172 LINC02213 LOC105369214
GH05J010484 Enhancer 1.3 FANTOM5 Ensembl ENCODE 11.5 +141.7 141730 4.2 CREB1 TEAD4 IKZF1 ZNF692 JUND PHF21A ZIC2 PKNOX1 MTA1 REST LINC02213 ANKRD33B-AS1 ANKRD33B RPL30P7 lnc-CMBL-9 LINC01513 LOC105369214
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ANKRD33B-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ANKRD33B-AS1 Gene

Genomic Locations for ANKRD33B-AS1 Gene
chr5:10,627,260-10,628,225
(GRCh38/hg38)
Size:
966 bases
Orientation:
Minus strand
chr5:10,627,372-10,628,337
(GRCh37/hg19)
Size:
966 bases
Orientation:
Minus strand

Genomic View for ANKRD33B-AS1 Gene

Genes around ANKRD33B-AS1 on UCSC Golden Path with GeneCards custom track
ANKRD33B-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ANKRD33B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD33B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ANKRD33B-AS1 Gene

Proteins for ANKRD33B-AS1 Gene

Post-translational modifications for ANKRD33B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD33B-AS1 Gene

Domains & Families for ANKRD33B-AS1 Gene

Gene Families for ANKRD33B-AS1 Gene

genes like me logo Genes that share domains with ANKRD33B-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ANKRD33B-AS1 Gene

Function for ANKRD33B-AS1 Gene

Phenotypes From GWAS Catalog for ANKRD33B-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD33B-AS1 Gene

Localization for ANKRD33B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD33B-AS1 Gene

Pathways & Interactions for ANKRD33B-AS1 Gene

PathCards logo

SuperPathways for ANKRD33B-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANKRD33B-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ANKRD33B-AS1 Gene

Drugs & Compounds for ANKRD33B-AS1 Gene

No Compound Related Data Available

Transcripts for ANKRD33B-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ANKRD33B-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000611DC2_9606 lncRNA 522 5

HGNC: 41298,

Ensembl: ENST00000506304 (view in UCSC) ,

LncBook: HSALNT0084506,

LNCipedia: ANKRD33B-AS1:1,

NONCODE: NONHSAT100464.2,

ANKRD33B-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ANKRD33B-AS1 Gene

1 NCBI additional mRNA sequence :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD33B-AS1 Gene

No ASD Table

Relevant External Links for ANKRD33B-AS1 Gene

GeneLoc Exon Structure for
ANKRD33B-AS1

Expression for ANKRD33B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ANKRD33B-AS1 Gene

genes like me logo Genes that share expression patterns with ANKRD33B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD33B-AS1 Gene

Orthologs for ANKRD33B-AS1 Gene

Evolution for ANKRD33B-AS1 Gene

ENSEMBL:
Gene Tree for ANKRD33B-AS1 (if available)
TreeFam:
Gene Tree for ANKRD33B-AS1 (if available)

No data available for Orthologs for ANKRD33B-AS1 Gene

Paralogs for ANKRD33B-AS1 Gene

No data available for Paralogs for ANKRD33B-AS1 Gene

Variants for ANKRD33B-AS1 Gene

Additional Variant Information for ANKRD33B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD33B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ANKRD33B-AS1 Gene

Disorders for ANKRD33B-AS1 Gene

No disorders were found for ANKRD33B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ANKRD33B-AS1 Gene

Publications for ANKRD33B-AS1 Gene

No publications were found for ANKRD33B-AS1 Gene.

No data available for Mastermind for ANKRD33B-AS1 Gene

Products for ANKRD33B-AS1 Gene

Sources for ANKRD33B-AS1 Gene