Aliases for ANKRD30BP3 Gene

Aliases for ANKRD30BP3 Gene

  • Ankyrin Repeat Domain 30B Pseudogene 3 2 3 5
  • Ankyrin Repeat Domain-Containing Protein 30B Pseudogene 3
  • ANKRD30BP3 5

External Ids for ANKRD30BP3 Gene

Previous GeneCards Identifiers for ANKRD30BP3 Gene

  • GC10P045651

Summaries for ANKRD30BP3 Gene

GeneCards Summary for ANKRD30BP3 Gene

ANKRD30BP3 (Ankyrin Repeat Domain 30B Pseudogene 3) is a Pseudogene.

Additional gene information for ANKRD30BP3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ANKRD30BP3 Gene

Genomics for ANKRD30BP3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ANKRD30BP3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J045154 Enhancer 0.3 Ensembl 600.7 +0.1 138 0.4 ZNF610 PKNOX1 ANKRD30BP3 RSU1P2 ZNF22 MIR3156-1 ENSG00000243349 OR13A1
GH10J045238 Enhancer 0.6 Ensembl 10.3 +85.7 85739 4 MGA LEF1 TRIM24 CEBPG SPI1 TAL1 ATF4 ZFP91 DPF2 CEBPB ENSG00000227683 ZNF22 ZNF22-AS1 ZFAND4 ANKRD30BP3 OR13A1 RSU1P2 AGAP4 ALOX5 CUBNP2
GH10J045143 Enhancer 0.5 Ensembl 7.2 -9.8 -9761 2.2 ZNF512 CEBPG ATF4 ZNF366 ARID1B ANKRD30BP3 ZNF22 ENSG00000277757 RSU1P2 ENSG00000243349 CUBNP3 OR13A1
GH10J045159 Enhancer 0.8 FANTOM5 Ensembl ENCODE 0.4 +5.7 5739 2.8 NR3C1 FOSL1 ZNF26 ATF3 FOS FAM21FP PARGP1 ALOX5 MIR3156-1 ANKRD30BP3 ENSG00000243349 OR13A1 ZNF22
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ANKRD30BP3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ANKRD30BP3 Gene

Genomic Locations for ANKRD30BP3 Gene
chr10:45,154,662-45,186,041
(GRCh38/hg38)
Size:
31,380 bases
Orientation:
Plus strand
chr10:45,650,110-45,681,489
(GRCh37/hg19)
Size:
31,380 bases
Orientation:
Plus strand

Genomic View for ANKRD30BP3 Gene

Genes around ANKRD30BP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD30BP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD30BP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD30BP3 Gene

Proteins for ANKRD30BP3 Gene

Post-translational modifications for ANKRD30BP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD30BP3 Gene

Domains & Families for ANKRD30BP3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ANKRD30BP3 Gene

Function for ANKRD30BP3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD30BP3 Gene

Localization for ANKRD30BP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD30BP3 Gene

Pathways & Interactions for ANKRD30BP3 Gene

PathCards logo

SuperPathways for ANKRD30BP3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANKRD30BP3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ANKRD30BP3 Gene

Drugs & Compounds for ANKRD30BP3 Gene

No Compound Related Data Available

Transcripts for ANKRD30BP3 Gene

mRNA/cDNA for ANKRD30BP3 Gene

3 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD30BP3 Gene

No ASD Table

Relevant External Links for ANKRD30BP3 Gene

GeneLoc Exon Structure for
ANKRD30BP3

Expression for ANKRD30BP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ANKRD30BP3 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD30BP3 Gene

This gene is overexpressed in Testis (x36.1).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ANKRD30BP3

SOURCE GeneReport for Unigene cluster for ANKRD30BP3 Gene:

Hs.666134
genes like me logo Genes that share expression patterns with ANKRD30BP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD30BP3 Gene

Orthologs for ANKRD30BP3 Gene

Evolution for ANKRD30BP3 Gene

ENSEMBL:
Gene Tree for ANKRD30BP3 (if available)
TreeFam:
Gene Tree for ANKRD30BP3 (if available)

No data available for Orthologs for ANKRD30BP3 Gene

Paralogs for ANKRD30BP3 Gene

No data available for Paralogs for ANKRD30BP3 Gene

Variants for ANKRD30BP3 Gene

Structural Variations from Database of Genomic Variants (DGV) for ANKRD30BP3 Gene

Variant ID Type Subtype PubMed ID
esv2750897 CNV loss 17911159
esv3623082 CNV gain 21293372
esv3623084 CNV loss 21293372
esv3623085 CNV loss 21293372
esv3891797 CNV gain 25118596
esv3891798 CNV gain 25118596
nsv819571 CNV gain 19587683
nsv831848 CNV gain 17160897
nsv947903 CNV duplication 23825009
nsv947904 CNV duplication 23825009
nsv947905 CNV duplication 23825009
nsv947906 CNV duplication 23825009

Additional Variant Information for ANKRD30BP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD30BP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for ANKRD30BP3 Gene

Disorders for ANKRD30BP3 Gene

Additional Disease Information for ANKRD30BP3

No disorders were found for ANKRD30BP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD30BP3 Gene

Publications for ANKRD30BP3 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3

Products for ANKRD30BP3 Gene

Sources for ANKRD30BP3 Gene