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Aliases for ANKRD26P3 Gene

Aliases for ANKRD26P3 Gene

  • Ankyrin Repeat Domain 26 Pseudogene 3 2 3 5
  • Long Intergenic Non-Protein Coding RNA 414 2 3
  • LINC00414 3

External Ids for ANKRD26P3 Gene

Previous HGNC Symbols for ANKRD26P3 Gene

  • LINC00414

Previous GeneCards Identifiers for ANKRD26P3 Gene

  • GC13M019838

Summaries for ANKRD26P3 Gene

GeneCards Summary for ANKRD26P3 Gene

ANKRD26P3 (Ankyrin Repeat Domain 26 Pseudogene 3) is a Pseudogene.

Additional gene information for ANKRD26P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD26P3 Gene

Genomics for ANKRD26P3 Gene

GeneHancer (GH) Regulatory Elements for ANKRD26P3 Gene

Promoters and enhancers for ANKRD26P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J019344 Promoter 0.5 Ensembl 650.7 +0.3 272 0.6 LINC00421 ANKRD26P3 PSPC1P1 MRPL3P1
GH13J019284 Enhancer 0.2 FANTOM5 0.2 +60.1 60102 0.1 TUBA3C GC13M019296 PIR49599 ENSG00000232243 ANKRD26P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ANKRD26P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ANKRD26P3 Gene

Genomic Locations for ANKRD26P3 Gene
chr13:19,262,800-19,344,973
(GRCh38/hg38)
Size:
82,174 bases
Orientation:
Minus strand
chr13:19,836,940-19,919,113
(GRCh37/hg19)

Genomic View for ANKRD26P3 Gene

Genes around ANKRD26P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD26P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD26P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD26P3 Gene

Proteins for ANKRD26P3 Gene

Post-translational modifications for ANKRD26P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD26P3 Gene

Domains & Families for ANKRD26P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANKRD26P3 Gene

Function for ANKRD26P3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD26P3 Gene

Localization for ANKRD26P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD26P3 Gene

Pathways & Interactions for ANKRD26P3 Gene

SuperPathways for ANKRD26P3 Gene

No Data Available

Interacting Proteins for ANKRD26P3 Gene

Gene Ontology (GO) - Biological Process for ANKRD26P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD26P3 Gene

Drugs & Compounds for ANKRD26P3 Gene

No Compound Related Data Available

Transcripts for ANKRD26P3 Gene

mRNA/cDNA for ANKRD26P3 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKRD26P3 Gene

Ankyrin repeat domain 26 pseudogene 3:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD26P3 Gene

No ASD Table

Relevant External Links for ANKRD26P3 Gene

GeneLoc Exon Structure for
ANKRD26P3
ECgene alternative splicing isoforms for
ANKRD26P3

Expression for ANKRD26P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ANKRD26P3 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD26P3 Gene

This gene is overexpressed in Testis (x32.4).

NURSA nuclear receptor signaling pathways regulating expression of ANKRD26P3 Gene:

ANKRD26P3

SOURCE GeneReport for Unigene cluster for ANKRD26P3 Gene:

Hs.129283
genes like me logo Genes that share expression patterns with ANKRD26P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD26P3 Gene

Orthologs for ANKRD26P3 Gene

Evolution for ANKRD26P3 Gene

ENSEMBL:
Gene Tree for ANKRD26P3 (if available)
TreeFam:
Gene Tree for ANKRD26P3 (if available)

No data available for Orthologs for ANKRD26P3 Gene

Paralogs for ANKRD26P3 Gene

No data available for Paralogs for ANKRD26P3 Gene

Variants for ANKRD26P3 Gene

Sequence variations from dbSNP and Humsavar for ANKRD26P3 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000102377 -- 19,291,623(-) T/C intron_variant
rs1000116373 -- 19,306,404(-) T/C intron_variant
rs1000144364 -- 19,340,850(-) T/C intron_variant
rs1000145089 -- 19,300,161(-) AAAA/AAAAA intron_variant
rs1000179555 -- 19,283,190(-) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD26P3 Gene

Variant ID Type Subtype PubMed ID
dgv334e199 CNV deletion 23128226
esv2747051 CNV deletion 23290073
esv2747053 CNV deletion 23290073
esv3580558 CNV loss 25503493
esv3631384 CNV gain 21293372
esv3631385 CNV loss 21293372
esv3631386 CNV loss 21293372
nsv1047555 CNV loss 25217958
nsv1069732 CNV deletion 25765185
nsv1071083 CNV deletion 25765185
nsv1115628 CNV deletion 24896259
nsv1136166 CNV deletion 24896259
nsv1136167 CNV deletion 24896259
nsv1143585 CNV deletion 24896259
nsv1148310 CNV deletion 26484159
nsv976077 CNV duplication 23825009
nsv983551 CNV duplication 23825009

Additional Variant Information for ANKRD26P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD26P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANKRD26P3 Gene

Disorders for ANKRD26P3 Gene

Additional Disease Information for ANKRD26P3

No disorders were found for ANKRD26P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD26P3 Gene

Publications for ANKRD26P3 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for ANKRD26P3 Gene

Sources for ANKRD26P3 Gene

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