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Aliases for ANKRD26P1 Gene

Aliases for ANKRD26P1 Gene

  • Ankyrin Repeat Domain 26 Pseudogene 1 2 3 5

External Ids for ANKRD26P1 Gene

Previous GeneCards Identifiers for ANKRD26P1 Gene

  • GC16M045066
  • GC16M032391

Summaries for ANKRD26P1 Gene

GeneCards Summary for ANKRD26P1 Gene

ANKRD26P1 (Ankyrin Repeat Domain 26 Pseudogene 1) is a Pseudogene.

Additional gene information for ANKRD26P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD26P1 Gene

Genomics for ANKRD26P1 Gene

GeneHancer (GH) Regulatory Elements for ANKRD26P1 Gene

Promoters and enhancers for ANKRD26P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J046686 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 5.8 -120.0 -119955 5.8 HDGF PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ORC6 VPS35 GPT2 SHCBP1 ENSG00000261131 MYLK3 ANKRD26P1 ENSG00000280376
GH16J046882 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 3.9 -316.1 -316066 6.2 PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 GPT2 ENSG00000261131 SHCBP1 ANKRD26P1 GC16P046894
GH16J046857 Enhancer 1 Ensembl ENCODE dbSUPER 4.2 -289.1 -289144 1.9 CTCF PKNOX1 ATF1 PHF21A RXRA GFI1B DNMT3B RAD21 SP1 TGIF2 SHCBP1 ANKRD26P1 ENSG00000261725 GPT2
GH16J046761 Enhancer 0.5 dbSUPER 4.5 -194.2 -194180 3.2 SCRT1 GATA3 SCRT2 CREB1 FOSL2 FOS SHCBP1 ANKRD26P1 GC16M046768 MYLK3 GC16P046705
GH16J046715 Enhancer 0.4 dbSUPER 5.6 -146.7 -146699 1.1 BCOR RBAK ZMYM3 ANKRD26P1 GC16P046705 GC16M046768 MYLK3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ANKRD26P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ANKRD26P1 Gene

Genomic Locations for ANKRD26P1 Gene
chr16:46,469,337-46,569,097
(GRCh38/hg38)
Size:
99,761 bases
Orientation:
Minus strand
chr16:46,503,249-46,603,009
(GRCh37/hg19)

Genomic View for ANKRD26P1 Gene

Genes around ANKRD26P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD26P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD26P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD26P1 Gene

Proteins for ANKRD26P1 Gene

  • Protein details for ANKRD26P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6NSI1-AR26L_HUMAN
    Recommended name:
    Putative ankyrin repeat domain-containing protein 26-like protein
    Protein Accession:
    Q6NSI1

    Protein attributes for ANKRD26P1 Gene

    Size:
    321 amino acids
    Molecular mass:
    35437 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ANKRD26P1 Gene

Post-translational modifications for ANKRD26P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD26P1 Gene

Domains & Families for ANKRD26P1 Gene

Protein Domains for ANKRD26P1 Gene

Suggested Antigen Peptide Sequences for ANKRD26P1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ANKRD26P1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for ANKRD26P1 Gene

Function for ANKRD26P1 Gene

Gene Ontology (GO) - Molecular Function for ANKRD26P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with ANKRD26P1: view

Phenotypes for ANKRD26P1 Gene

genes like me logo Genes that share phenotypes with ANKRD26P1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ANKRD26P1

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD26P1 Gene

Localization for ANKRD26P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD26P1 Gene

Pathways & Interactions for ANKRD26P1 Gene

SuperPathways for ANKRD26P1 Gene

No Data Available

Interacting Proteins for ANKRD26P1 Gene

Selected Interacting proteins: Q6NSI1-AR26L_HUMAN for ANKRD26P1 Gene via IID UniProtKB

Gene Ontology (GO) - Biological Process for ANKRD26P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD26P1 Gene

Drugs & Compounds for ANKRD26P1 Gene

No Compound Related Data Available

Transcripts for ANKRD26P1 Gene

mRNA/cDNA for ANKRD26P1 Gene

(5) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(21) Selected AceView cDNA sequences:
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKRD26P1 Gene

Ankyrin repeat domain 26 pseudogene 1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ANKRD26P1

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD26P1 Gene

No ASD Table

Relevant External Links for ANKRD26P1 Gene

GeneLoc Exon Structure for
ANKRD26P1
ECgene alternative splicing isoforms for
ANKRD26P1

Expression for ANKRD26P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ANKRD26P1 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD26P1 Gene

This gene is overexpressed in Testis (x49.5).

Protein differential expression in normal tissues from HIPED for ANKRD26P1 Gene

This gene is overexpressed in Plasma (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ANKRD26P1 Gene



Protein tissue co-expression partners for ANKRD26P1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of ANKRD26P1 Gene:

ANKRD26P1

SOURCE GeneReport for Unigene cluster for ANKRD26P1 Gene:

Hs.97414
genes like me logo Genes that share expression patterns with ANKRD26P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD26P1 Gene

Orthologs for ANKRD26P1 Gene

Evolution for ANKRD26P1 Gene

ENSEMBL:
Gene Tree for ANKRD26P1 (if available)
TreeFam:
Gene Tree for ANKRD26P1 (if available)

No data available for Orthologs for ANKRD26P1 Gene

Paralogs for ANKRD26P1 Gene

(19) SIMAP similar genes for ANKRD26P1 Gene using alignment to 1 proteins:

  • AR26L_HUMAN
genes like me logo Genes that share paralogs with ANKRD26P1: view

No data available for Paralogs for ANKRD26P1 Gene

Variants for ANKRD26P1 Gene

Sequence variations from dbSNP and Humsavar for ANKRD26P1 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000005761 -- 46,548,118(-) G/A intron_variant
rs1000037064 -- 46,547,849(-) A/G intron_variant
rs1000044147 -- 46,496,756(-) A/T intron_variant
rs1000096622 -- 46,504,511(-) C/A intron_variant
rs1000165697 -- 46,474,317(-) C/T non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD26P1 Gene

Variant ID Type Subtype PubMed ID
dgv2975n100 CNV gain 25217958
dgv5101n54 CNV gain 21841781
esv3571142 CNV gain 25503493
esv3571153 CNV gain 25503493
esv3638530 CNV gain 21293372
esv3638533 CNV gain 21293372
esv3638534 CNV gain 21293372
esv9407 CNV gain 19470904
nsv1056162 CNV gain 25217958
nsv1060969 CNV loss 25217958
nsv1066115 CNV gain 25217958
nsv1134540 CNV deletion 24896259
nsv428327 CNV gain 18775914
nsv526656 CNV gain 19592680
nsv572529 CNV loss 21841781
nsv572535 CNV loss 21841781
nsv833216 CNV loss 17160897
nsv952666 CNV duplication 24416366

Additional Variant Information for ANKRD26P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD26P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANKRD26P1 Gene

Disorders for ANKRD26P1 Gene

Additional Disease Information for ANKRD26P1

No disorders were found for ANKRD26P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD26P1 Gene

Publications for ANKRD26P1 Gene

  1. Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes. (PMID: 25609649) Li X … Chen J (Molecular systems biology 2015) 3 58
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin EL … Gygi SP (Cell 2015) 3 58
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3 58
  4. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J … Pennacchio LA (Nature 2004) 4 58
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 58

Products for ANKRD26P1 Gene

Sources for ANKRD26P1 Gene

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