Aliases for ANKRD20A18P Gene

Aliases for ANKRD20A18P Gene

  • Ankyrin Repeat Domain 20 Family Member A18, Pseudogene 2 3 5
  • Ankyrin Repeat Domain 20 Family, Member A18, Pseudogene 2
  • Ankyrin Repeat Domain 20 Family, Member A3 Pseudogene 3
  • Chromosome 21 Open Reading Frame 126 2
  • ANKRD20A18P 5
  • C21orf126 3

External Ids for ANKRD20A18P Gene

Previous HGNC Symbols for ANKRD20A18P Gene

  • C21orf126

Previous GeneCards Identifiers for ANKRD20A18P Gene

  • GC21P015438

Summaries for ANKRD20A18P Gene

GeneCards Summary for ANKRD20A18P Gene

ANKRD20A18P (Ankyrin Repeat Domain 20 Family Member A18, Pseudogene) is a Pseudogene.

Additional gene information for ANKRD20A18P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ANKRD20A18P Gene

Genomics for ANKRD20A18P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ANKRD20A18P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J014064 Promoter 0.8 Ensembl 613.9 +0.1 51 1.8 CTCF TARDBP ZFX HCFC1 ELK1 ELF1 SIN3A BHLHE40 ZNF687 MAZ ANKRD20A18P lnc-RBM11-6-001 lnc-RBM11-6-002 ANKRD20A11P RHOT1P2 ENSG00000224905 RNA5SP488 RF00001-200 LIPI POTED
GH21J014026 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas 10.6 -35.7 -35749 3.8 SP1 CREB1 PRDM10 FOS PRDM1 DDX20 ZNF143 PKNOX1 ELF4 POLR2A ENSG00000224905 LOC105377134 ANKRD20A18P RHOT1P2 LIPI lnc-RBM11-6-001 POTED
GH21J014120 Enhancer 0.5 Ensembl 6.7 +57.2 57150 2.8 CTCF ZBTB33 ZNF143 REST RAD21 TRIM22 SMC3 L3MBTL2 LIPI ANKRD20A18P ENSG00000224905 piR-53177-036 piR-38352-338 ERLEC1P1 POTED
GH21J014104 Enhancer 0.3 Ensembl 10.1 +40.6 40551 0.8 ZNF592 piR-53177-036 ANKRD20A18P ENSG00000224905 LIPI piR-57460-417 ERLEC1P1 POTED
GH21J014057 Enhancer 0.2 Ensembl 13.6 -6.3 -6349 1 ANKRD20A18P RHOT1P2 ENSG00000224905 lnc-RBM11-6-001 LOC105377134 LIPI POTED
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ANKRD20A18P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ANKRD20A18P Gene

Genomic Locations for ANKRD20A18P Gene
chr21:14,064,250-14,069,088
(GRCh38/hg38)
Size:
4,839 bases
Orientation:
Plus strand
chr21:15,436,540-15,441,409
(GRCh37/hg19)
Size:
4,870 bases
Orientation:
Plus strand

Genomic View for ANKRD20A18P Gene

Genes around ANKRD20A18P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD20A18P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD20A18P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD20A18P Gene

Proteins for ANKRD20A18P Gene

Post-translational modifications for ANKRD20A18P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD20A18P Gene

Domains & Families for ANKRD20A18P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ANKRD20A18P Gene

Function for ANKRD20A18P Gene

Phenotypes From GWAS Catalog for ANKRD20A18P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD20A18P Gene

Localization for ANKRD20A18P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD20A18P Gene

Pathways & Interactions for ANKRD20A18P Gene

PathCards logo

SuperPathways for ANKRD20A18P Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANKRD20A18P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ANKRD20A18P Gene

Drugs & Compounds for ANKRD20A18P Gene

No Compound Related Data Available

Transcripts for ANKRD20A18P Gene

mRNA/cDNA for ANKRD20A18P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD20A18P Gene

No ASD Table

Relevant External Links for ANKRD20A18P Gene

GeneLoc Exon Structure for
ANKRD20A18P

Expression for ANKRD20A18P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ANKRD20A18P Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD20A18P Gene

This gene is overexpressed in Esophagus - Mucosa (x11.0), Testis (x7.4), and Colon - Sigmoid (x4.3).
genes like me logo Genes that share expression patterns with ANKRD20A18P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD20A18P Gene

Orthologs for ANKRD20A18P Gene

Evolution for ANKRD20A18P Gene

ENSEMBL:
Gene Tree for ANKRD20A18P (if available)
TreeFam:
Gene Tree for ANKRD20A18P (if available)

No data available for Orthologs for ANKRD20A18P Gene

Paralogs for ANKRD20A18P Gene

No data available for Paralogs for ANKRD20A18P Gene

Variants for ANKRD20A18P Gene

Additional Variant Information for ANKRD20A18P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD20A18P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ANKRD20A18P Gene

Disorders for ANKRD20A18P Gene

No disorders were found for ANKRD20A18P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ANKRD20A18P Gene

Publications for ANKRD20A18P Gene

No publications were found for ANKRD20A18P Gene.

Products for ANKRD20A18P Gene

Sources for ANKRD20A18P Gene