Aliases for ANKRD19P Gene

Aliases for ANKRD19P Gene

  • Ankyrin Repeat Domain 19, Pseudogene 2 3 5
  • ANKRD19 3 4
  • Ankyrin Repeat Domain-Containing Protein 19 Pseudogene 4
  • Putative Ankyrin Repeat Domain-Containing Protein 19 4
  • Ankyrin Repeat Domain 19 Pseudogene 2
  • Ankyrin Repeat Domain 19 2
  • BA526D8.2 3
  • ANKRD19P 5
  • FLJ36178 2

External Ids for ANKRD19P Gene

Previous HGNC Symbols for ANKRD19P Gene

  • ANKRD19

Previous GeneCards Identifiers for ANKRD19P Gene

  • GC09P095574

Summaries for ANKRD19P Gene

GeneCards Summary for ANKRD19P Gene

ANKRD19P (Ankyrin Repeat Domain 19, Pseudogene) is a Pseudogene.

Additional gene information for ANKRD19P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ANKRD19P Gene

Genomics for ANKRD19P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ANKRD19P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J092810 Promoter/Enhancer 1.1 Ensembl ENCODE 600.7 -0.4 -368 2 RNF2 ZNF692 LARP7 POLR2A PATZ1 CTCF ZNF501 EZH2 ELF4 ZNF600 ANKRD19P ENSG00000288062 ENSG00000288271 LOC101929748 piR-55577-002 NOL8 MTND4P15 CENPP RF00017-7714 BICD2
GH09J093003 Enhancer 0.9 ENCODE dbSUPER 6.3 +194.3 194284 1.1 GATAD2A CTCF JUND ZNF143 REST RAD21 HDAC1 SCRT2 NRF1 MGA CARD19 ENSG00000223446 SUSD3 ANKRD19P RF00017-7716 FGD3
GH09J093009 Enhancer 0.6 Ensembl dbSUPER 6.2 +200.3 200333 1 SCRT2 MNT SCRT1 ZNF48 FGD3 ANKRD19P RF00017-7716 LOC101927954 SUSD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ANKRD19P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ANKRD19P Gene

Genomic Locations for ANKRD19P Gene
chr9:92,809,568-92,838,457
(GRCh38/hg38)
Size:
28,890 bases
Orientation:
Plus strand
chr9:95,571,670-95,650,975
(GRCh37/hg19)
Size:
79,306 bases
Orientation:
Plus strand

Genomic View for ANKRD19P Gene

Genes around ANKRD19P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD19P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD19P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD19P Gene

Proteins for ANKRD19P Gene

  • Protein details for ANKRD19P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H560-ANR19_HUMAN
    Recommended name:
    Putative ankyrin repeat domain-containing protein 19
    Protein Accession:
    Q9H560
    Secondary Accessions:
    • A8K853
    • Q17RD3

    Protein attributes for ANKRD19P Gene

    Size:
    264 amino acids
    Molecular mass:
    30436 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ANKRD19P Gene

Post-translational modifications for ANKRD19P Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ANKRD19P Gene

Domains & Families for ANKRD19P Gene

Protein Domains for ANKRD19P Gene

InterPro:
Blocks:
  • Ankyrin repeat signature
ProtoNet:

Suggested Antigen Peptide Sequences for ANKRD19P Gene

GenScript: Design optimal peptide antigens:
  • Ankyrin repeat domain-containing protein 19 pseudogene (ANR19_HUMAN)
genes like me logo Genes that share domains with ANKRD19P: view

No data available for Gene Families , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ANKRD19P Gene

Function for ANKRD19P Gene

Phenotypes From GWAS Catalog for ANKRD19P Gene

Phenotypes for ANKRD19P Gene

genes like me logo Genes that share phenotypes with ANKRD19P: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ANKRD19P

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD19P Gene

Localization for ANKRD19P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD19P Gene

Pathways & Interactions for ANKRD19P Gene

PathCards logo

SuperPathways for ANKRD19P Gene

No Data Available

Interacting Proteins for ANKRD19P Gene

Selected Interacting proteins: Q9H560-ANR19_HUMAN for ANKRD19P Gene via IID

Symbol External ID(s) Details
TRIM25

Gene Ontology (GO) - Biological Process for ANKRD19P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD19P Gene

Drugs & Compounds for ANKRD19P Gene

No Compound Related Data Available

Transcripts for ANKRD19P Gene

mRNA/cDNA for ANKRD19P Gene

1 REFSEQ mRNAs :
7 NCBI additional mRNA sequence :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ANKRD19P

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD19P Gene

No ASD Table

Relevant External Links for ANKRD19P Gene

GeneLoc Exon Structure for
ANKRD19P

Expression for ANKRD19P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ANKRD19P Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD19P Gene

This gene is overexpressed in Testis (x8.0), Brain - Cortex (x5.2), Brain - Nucleus accumbens (basal ganglia) (x4.6), and Brain - Anterior cingulate cortex (BA24) (x4.1).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ANKRD19P

SOURCE GeneReport for Unigene cluster for ANKRD19P Gene:

Hs.643597
genes like me logo Genes that share expression patterns with ANKRD19P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD19P Gene

Orthologs for ANKRD19P Gene

Evolution for ANKRD19P Gene

ENSEMBL:
Gene Tree for ANKRD19P (if available)
TreeFam:
Gene Tree for ANKRD19P (if available)

No data available for Orthologs for ANKRD19P Gene

Paralogs for ANKRD19P Gene

genes like me logo Genes that share paralogs with ANKRD19P: view

No data available for Paralogs for ANKRD19P Gene

Variants for ANKRD19P Gene

Structural Variations from Database of Genomic Variants (DGV) for ANKRD19P Gene

Variant ID Type Subtype PubMed ID
esv3621090 CNV loss 21293372
nsv525363 CNV loss 19592680
nsv831654 CNV gain 17160897
nsv950896 CNV deletion 24416366
nsv972420 CNV duplication 23825009

Additional Variant Information for ANKRD19P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD19P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for ANKRD19P Gene

Disorders for ANKRD19P Gene

Additional Disease Information for ANKRD19P

No disorders were found for ANKRD19P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD19P Gene

Publications for ANKRD19P Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray SJ … Dunham I (Nature 2004) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4
  4. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for ANKRD19P Gene

Sources for ANKRD19P Gene