Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ANKRD18CP Gene

Aliases for ANKRD18CP Gene

  • Ankyrin Repeat Domain 18C, Pseudogene 2 3 5

External Ids for ANKRD18CP Gene

Previous GeneCards Identifiers for ANKRD18CP Gene

  • GC09M099919
  • GC09M099921
  • GC09M099928
  • GC09M097156

Summaries for ANKRD18CP Gene

GeneCards Summary for ANKRD18CP Gene

ANKRD18CP (Ankyrin Repeat Domain 18C, Pseudogene) is a Pseudogene.

Additional gene information for ANKRD18CP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD18CP Gene

Genomics for ANKRD18CP Gene

GeneHancer (GH) Regulatory Elements for ANKRD18CP Gene

Promoters and enhancers for ANKRD18CP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I097220 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 577.3 +0.1 63 3 MZF1 ZNF335 ZEB2 ZNF843 SNIP1 SMARCA4 ZBTB33 ZBTB26 CTCF BCOR ANKRD18CP GC09M097223 PIR49577 VN1R51P CCDC180 MFSD14C NCBP1 NUTM2G ZNF782 ENSG00000203279
GH09I097219 Enhancer 0.3 ENCODE 575.3 +1.7 1704 0.2 POLR2A ANKRD18CP GC09M097223 PIR49577 VN1R51P ENSG00000203279 ZNF322P1
GH09I097236 Promoter/Enhancer 1.5 Ensembl ENCODE 32.2 -17.1 -17079 2.9 HDGF ARNT ARID4B SIN3A FEZF1 ZNF2 YY1 POLR2B ZNF766 E2F8 LOC100499484 LOC100499484-C9ORF174 ENSG00000254483 ENSG00000203279 ANKRD18CP CCDC180 MFSD14C NCBP1 NUTM2G ZNF782
GH09I097306 Promoter/Enhancer 1.3 EPDnew Ensembl ENCODE 21.2 -86.3 -86311 1.6 CTCF USF1 RFX1 MAX SIN3A USF2 RAD21 ZKSCAN1 EGR1 HNF4A CCDC180 ANKRD18CP ENSG00000203279 ENSG00000235494 MIR1302-8 LOC100499484-C9ORF174
GH09I097292 Enhancer 1 Ensembl ENCODE 21.2 -72.2 -72206 1.8 ELF3 PKNOX1 FOXA2 MLX ARID4B DMAP1 RARA CREM MXD4 NR2F2 CCDC180 ANKRD18CP ENSG00000203279 ENSG00000254633 LOC100499484-C9ORF174 LOC100499484
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ANKRD18CP on UCSC Golden Path with GeneCards custom track

Genomic Locations for ANKRD18CP Gene

Genomic Locations for ANKRD18CP Gene
chr9:97,148,127-97,221,318
(GRCh38/hg38)
Size:
73,192 bases
Orientation:
Minus strand
chr9:99,914,279-99,983,529
(GRCh37/hg19)

Genomic View for ANKRD18CP Gene

Genes around ANKRD18CP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD18CP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD18CP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD18CP Gene

Proteins for ANKRD18CP Gene

Post-translational modifications for ANKRD18CP Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD18CP Gene

Domains & Families for ANKRD18CP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANKRD18CP Gene

Function for ANKRD18CP Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD18CP Gene

Localization for ANKRD18CP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD18CP Gene

Pathways & Interactions for ANKRD18CP Gene

SuperPathways for ANKRD18CP Gene

No Data Available

Interacting Proteins for ANKRD18CP Gene

Gene Ontology (GO) - Biological Process for ANKRD18CP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD18CP Gene

Drugs & Compounds for ANKRD18CP Gene

No Compound Related Data Available

Transcripts for ANKRD18CP Gene

mRNA/cDNA for ANKRD18CP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD18CP Gene

No ASD Table

Relevant External Links for ANKRD18CP Gene

GeneLoc Exon Structure for
ANKRD18CP
ECgene alternative splicing isoforms for
ANKRD18CP

Expression for ANKRD18CP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ANKRD18CP Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD18CP Gene

This gene is overexpressed in Testis (x12.7).

NURSA nuclear receptor signaling pathways regulating expression of ANKRD18CP Gene:

ANKRD18CP
genes like me logo Genes that share expression patterns with ANKRD18CP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD18CP Gene

Orthologs for ANKRD18CP Gene

Evolution for ANKRD18CP Gene

ENSEMBL:
Gene Tree for ANKRD18CP (if available)
TreeFam:
Gene Tree for ANKRD18CP (if available)

No data available for Orthologs for ANKRD18CP Gene

Paralogs for ANKRD18CP Gene

No data available for Paralogs for ANKRD18CP Gene

Variants for ANKRD18CP Gene

Sequence variations from dbSNP and Humsavar for ANKRD18CP Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000009102 -- 97,208,687(-) T/C intron_variant
rs1000041202 -- 97,215,254(-) G/A intron_variant
rs1000144660 -- 97,208,848(-) T/G intron_variant
rs1000152997 -- 97,166,584(-) G/A intron_variant
rs1000171772 -- 97,159,450(-) G/C intron_variant

Additional Variant Information for ANKRD18CP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD18CP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ANKRD18CP Gene

Disorders for ANKRD18CP Gene

Additional Disease Information for ANKRD18CP

No disorders were found for ANKRD18CP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD18CP Gene

Publications for ANKRD18CP Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for ANKRD18CP Gene

Sources for ANKRD18CP Gene

Content
Loading form....