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Aliases for ANKRD10-IT1 Gene

Subcategory (RNA class) for ANKRD10-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ANKRD10-IT1 Gene

  • ANKRD10 Intronic Transcript 1 2 3 5
  • ANKRD10 Intronic Transcript 1 (Non-Protein Coding) 2 3

External Ids for ANKRD10-IT1 Gene

Previous GeneCards Identifiers for ANKRD10-IT1 Gene

  • GC13M111548

Summaries for ANKRD10-IT1 Gene

GeneCards Summary for ANKRD10-IT1 Gene

ANKRD10-IT1 (ANKRD10 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ANKRD10-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD10-IT1 Gene

Genomics for ANKRD10-IT1 Gene

GeneHancer (GH) Regulatory Elements for ANKRD10-IT1 Gene

Promoters and enhancers for ANKRD10-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J110900 Enhancer 0.5 UCNEbase 650.7 -1.4 -1442 0.3 MITF ANKRD10-IT1 LINC00346 NAXD ANKRD10
GH13J110963 Enhancer 1.5 Ensembl ENCODE dbSUPER 34.1 -66.7 -66669 5.3 CLOCK IRF4 E2F8 ZNF416 SP3 MEF2D ZNF585B NBN NR2C1 KDM1A LINC00431 NAXD ANKRD10 ANKRD10-IT1 CARS2 LINC00346 ARHGEF7 LOC105370364
GH13J110710 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 20 +185.0 184990 6.4 ZFP64 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC SSRP1 CARS2 LOC105376684 ING1 PIR46428 ARHGEF7 ANKRD10-IT1 RPL21P107 PARP1P1 RN7SKP10 LOC102724489
GH13J110911 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12.1 -15.5 -15537 6.5 HDGF PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 POLR2B ZNF207 ANKRD10 ENSG00000277767 ANKRD10-IT1 RAB20 NAXD ING1 ARHGEF7
GH13J110868 Promoter/Enhancer 1.6 Ensembl ENCODE 16.6 +28.5 28546 4 PKNOX1 MLX ARNT ARID4B NEUROD1 SIN3A FEZF1 ZNF2 POLR2B ZNF766 LINC00346 GC13M110864 ANKRD10-IT1 CARS2 NAXD GC13P110892
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ANKRD10-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ANKRD10-IT1 Gene

Genomic Locations for ANKRD10-IT1 Gene
chr13:110,894,639-110,899,172
(GRCh38/hg38)
Size:
4,534 bases
Orientation:
Minus strand
chr13:111,547,406-111,553,567
(GRCh37/hg19)

Genomic View for ANKRD10-IT1 Gene

Genes around ANKRD10-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD10-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD10-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ANKRD10-IT1 Gene

Proteins for ANKRD10-IT1 Gene

Post-translational modifications for ANKRD10-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD10-IT1 Gene

Domains & Families for ANKRD10-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANKRD10-IT1 Gene

Function for ANKRD10-IT1 Gene

Phenotypes From GWAS Catalog for ANKRD10-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD10-IT1 Gene

Localization for ANKRD10-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD10-IT1 Gene

Pathways & Interactions for ANKRD10-IT1 Gene

SuperPathways for ANKRD10-IT1 Gene

No Data Available

Interacting Proteins for ANKRD10-IT1 Gene

Gene Ontology (GO) - Biological Process for ANKRD10-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD10-IT1 Gene

Drugs & Compounds for ANKRD10-IT1 Gene

No Compound Related Data Available

Transcripts for ANKRD10-IT1 Gene

mRNA/cDNA for ANKRD10-IT1 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Unigene Clusters for ANKRD10-IT1 Gene

ANKRD10 intronic transcript 1 (non-protein coding):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD10-IT1 Gene

No ASD Table

Relevant External Links for ANKRD10-IT1 Gene

GeneLoc Exon Structure for
ANKRD10-IT1
ECgene alternative splicing isoforms for
ANKRD10-IT1

Expression for ANKRD10-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ANKRD10-IT1 Gene

SOURCE GeneReport for Unigene cluster for ANKRD10-IT1 Gene:

Hs.655994
genes like me logo Genes that share expression patterns with ANKRD10-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD10-IT1 Gene

Orthologs for ANKRD10-IT1 Gene

Evolution for ANKRD10-IT1 Gene

ENSEMBL:
Gene Tree for ANKRD10-IT1 (if available)
TreeFam:
Gene Tree for ANKRD10-IT1 (if available)

No data available for Orthologs for ANKRD10-IT1 Gene

Paralogs for ANKRD10-IT1 Gene

No data available for Paralogs for ANKRD10-IT1 Gene

Variants for ANKRD10-IT1 Gene

Additional Variant Information for ANKRD10-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD10-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ANKRD10-IT1 Gene

Disorders for ANKRD10-IT1 Gene

Additional Disease Information for ANKRD10-IT1

No disorders were found for ANKRD10-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD10-IT1 Gene

Publications for ANKRD10-IT1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for ANKRD10-IT1 Gene

Sources for ANKRD10-IT1 Gene

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