Aliases for ANK2-AS1 Gene

Subcategory (RNA class) for ANK2-AS1 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for ANK2-AS1 Gene

  • ANK2 Antisense RNA 1 2 3

External Ids for ANK2-AS1 Gene

Summaries for ANK2-AS1 Gene

GeneCards Summary for ANK2-AS1 Gene

ANK2-AS1 (ANK2 Antisense RNA 1) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for ANK2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ANK2-AS1 Gene

Genomics for ANK2-AS1 Gene

GeneHancer (GH) Regulatory Elements for ANK2-AS1 Gene

Promoters and enhancers for ANK2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J113044 Enhancer 0.3 FANTOM5 750.6 +0.4 377 0.2 ATF2 ANK2-AS1 ENSG00000248152 ANK2 ENSG00000249373
GH04J113048 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE 0.6 -4.9 -4869 2.2 HLF ZSCAN4 POLR2A ZNF501 ZNF366 ZNF335 ANK2 ANK2-AS1 ENSG00000248152
GH04J113052 Enhancer 0.7 ENCODE 0.4 -7.7 -7655 1.3 MYC MLLT1 CREM IKZF1 IKZF2 CBFB SCRT2 DPF2 EED BCL11A ANK2-AS1 ENSG00000248152 ANK2
GH04J113069 Enhancer 0.6 Ensembl 0.3 -24.4 -24376 0.8 ZNF133 RAD21 SP1 RXRA JUND OSR2 ATF3 YY1 ZBTB33 GABPA ZGRF1 ENSG00000248152 ANK2-AS1 ANK2
GH04J113065 Enhancer 0.6 Ensembl 0.3 -20.4 -20376 0.8 FOXA1 SP1 RXRA FOXA2 JUND POLR2A YY1 ZBTB33 HNF4A REST ENSG00000248152 ANK2-AS1 ANK2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ANK2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ANK2-AS1 Gene

Genomic Locations for ANK2-AS1 Gene
chr4:113,029,508-113,045,225
(GRCh38/hg38)
Size:
15,718 bases
Orientation:
Minus strand

Genomic View for ANK2-AS1 Gene

Genes around ANK2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANK2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANK2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANK2-AS1 Gene

Proteins for ANK2-AS1 Gene

Post-translational modifications for ANK2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANK2-AS1 Gene

Domains & Families for ANK2-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ANK2-AS1 Gene

Function for ANK2-AS1 Gene

Phenotypes From GWAS Catalog for ANK2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANK2-AS1 Gene

Localization for ANK2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANK2-AS1 Gene

Pathways & Interactions for ANK2-AS1 Gene

PathCards logo

SuperPathways for ANK2-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANK2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANK2-AS1 Gene

Drugs & Compounds for ANK2-AS1 Gene

No Compound Related Data Available

Transcripts for ANK2-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for ANK2-AS1 Gene

No ASD Table

Relevant External Links for ANK2-AS1 Gene

GeneLoc Exon Structure for
ANK2-AS1
ECgene alternative splicing isoforms for
ANK2-AS1

No data available for mRNA/cDNA for ANK2-AS1 Gene

Expression for ANK2-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANK2-AS1 Gene

Orthologs for ANK2-AS1 Gene

No data available for Orthologs and Evolution for ANK2-AS1 Gene

Paralogs for ANK2-AS1 Gene

No data available for Paralogs for ANK2-AS1 Gene

Variants for ANK2-AS1 Gene

Sequence variations from dbSNP and Humsavar for ANK2-AS1 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000023152 -- 113,045,067(-) A/T genic_upstream_transcript_variant, non_coding_transcript_variant
rs1000070082 -- 113,031,490(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000487242 -- 113,040,359(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000581741 -- 113,039,966(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000910373 -- 113,031,944(-) T/C genic_downstream_transcript_variant, intron_variant

Additional Variant Information for ANK2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANK2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ANK2-AS1 Gene

Disorders for ANK2-AS1 Gene

No disorders were found for ANK2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ANK2-AS1 Gene

Publications for ANK2-AS1 Gene

No publications were found for ANK2-AS1 Gene.

No data available for External Links for ANK2-AS1 Gene

Products for ANK2-AS1 Gene

Sources for ANK2-AS1 Gene