Aliases for ANK2-AS1 Gene

Subcategory (RNA class) for ANK2-AS1 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ANK2-AS1 Gene

  • ANK2 Antisense RNA 1 2 3 5
  • ANK2-AS1 2 5
  • NONHSAG038675.2 91
  • Lnc-ZGRF1-5 165

External Ids for ANK2-AS1 Gene

Previous GeneCards Identifiers for ANK2-AS1 Gene

  • GC04M113030
  • GC04M113033

Summaries for ANK2-AS1 Gene

GeneCards Summary for ANK2-AS1 Gene

ANK2-AS1 (ANK2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ANK2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ANK2-AS1 Gene

Genomics for ANK2-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ANK2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J113073 Enhancer 0.2 Ensembl 600.7 -1.6 -1639 0.4 ANK2-AS1 MIR1243 ANK2 CAMK2D
GH04J113044 Enhancer 0.3 FANTOM5 12.2 +27.1 27114 0.2 ATF2 ANK2-AS1 ANK2 ENSG00000249373 CAMK2D
GH04J113069 Enhancer 0.6 Ensembl 0.7 +2.4 2361 0.8 REST SP1 OSR2 ATF3 YY1 GABPA ZBTB33 JUND NR2F2 KLF8 ANK2-AS1 ENSG00000249373 ANK2 CAMK2D
GH04J113048 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE 0.4 +21.9 21868 2.2 ZSCAN4 POLR2A ZNF501 ZNF600 ZNF335 SIN3A ZNF366 ZNF660 KLF10 HLF ANK2 ENSG00000249373 ANK2-AS1 CAMK2D
GH04J113080 Enhancer 0.6 Ensembl 0.4 -8.2 -8239 0.4 TOE1 CEBPA SOX13 RAD51 USF1 NFIL3 SOX5 HLF USF2 CEBPG ANK2-AS1 MIR1243 ANK2 CAMK2D
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ANK2-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ANK2-AS1 Gene

Genomic Locations for ANK2-AS1 Gene
chr4:112,973,272-113,071,962
(GRCh38/hg38)
Size:
98,691 bases
Orientation:
Minus strand
chr4:113,900,746-113,993,118
(GRCh37/hg19)
Size:
92,373 bases
Orientation:
Minus strand

Genomic View for ANK2-AS1 Gene

Genes around ANK2-AS1 on UCSC Golden Path with GeneCards custom track
ANK2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ANK2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANK2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANK2-AS1 Gene

Proteins for ANK2-AS1 Gene

Post-translational modifications for ANK2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANK2-AS1 Gene

Domains & Families for ANK2-AS1 Gene

Gene Families for ANK2-AS1 Gene

genes like me logo Genes that share domains with ANK2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ANK2-AS1 Gene

Function for ANK2-AS1 Gene

Phenotypes From GWAS Catalog for ANK2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANK2-AS1 Gene

Localization for ANK2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANK2-AS1 Gene

Pathways & Interactions for ANK2-AS1 Gene

PathCards logo

SuperPathways for ANK2-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANK2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ANK2-AS1 Gene

Drugs & Compounds for ANK2-AS1 Gene

No Compound Related Data Available

Transcripts for ANK2-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ANK2-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000061EF9D_9606 lncRNA 1176 3

Ensembl: ENST00000508959 (view in UCSC) ,

LNCipedia: lnc-ZGRF1-5:1,

NONCODE: NONHSAT097889.2,

URS0000EF5569_9606 lncRNA 1718 2

HGNC: 40076,

Ensembl: ENST00000668381 (view in UCSC) ,

URS0000EF4143_9606 lncRNA 816 1

Ensembl: ENST00000661685 (view in UCSC) ,

ANK2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ANK2-AS1 Gene

No ASD Table

Relevant External Links for ANK2-AS1 Gene

GeneLoc Exon Structure for
ANK2-AS1

No data available for mRNA/cDNA for ANK2-AS1 Gene

Expression for ANK2-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANK2-AS1 Gene

Orthologs for ANK2-AS1 Gene

Evolution for ANK2-AS1 Gene

ENSEMBL:
Gene Tree for ANK2-AS1 (if available)
TreeFam:
Gene Tree for ANK2-AS1 (if available)

No data available for Orthologs for ANK2-AS1 Gene

Paralogs for ANK2-AS1 Gene

No data available for Paralogs for ANK2-AS1 Gene

Variants for ANK2-AS1 Gene

Additional dbSNP identifiers (rs#s) for ANK2-AS1 Gene

Additional Variant Information for ANK2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANK2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ANK2-AS1 Gene

Disorders for ANK2-AS1 Gene

Additional Disease Information for ANK2-AS1

No disorders were found for ANK2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANK2-AS1 Gene

Publications for ANK2-AS1 Gene

No publications were found for ANK2-AS1 Gene.

No data available for Mastermind for ANK2-AS1 Gene

Products for ANK2-AS1 Gene

Sources for ANK2-AS1 Gene