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Aliases for ANAPC11 Gene

Aliases for ANAPC11 Gene

  • Anaphase Promoting Complex Subunit 11 2 3 5
  • Anaphase Promoting Complex Subunit 11 (Yeast APC11 Homolog) 2 3
  • Hepatocellular Carcinoma-Associated RING Finger Protein 3 4
  • Cyclosome Subunit 11 3 4
  • APC11 3 4
  • APC11 Anaphase Promoting Complex Subunit 11 Homolog 3
  • Anaphase-Promoting Complex Subunit 11 3
  • HSPC214 3
  • Apc11p 3

External Ids for ANAPC11 Gene

Previous GeneCards Identifiers for ANAPC11 Gene

  • GC17P079341
  • GC17P9I0152
  • GC17P080384
  • GC17P077442
  • GC17P079849
  • GC17P075220

Summaries for ANAPC11 Gene

GeneCards Summary for ANAPC11 Gene

ANAPC11 (Anaphase Promoting Complex Subunit 11) is a Protein Coding gene. Among its related pathways are PAK Pathway and Actin Nucleation by ARP-WASP Complex. Gene Ontology (GO) annotations related to this gene include ubiquitin-protein transferase activity and ubiquitin-ubiquitin ligase activity.

UniProtKB/Swiss-Prot for ANAPC11 Gene

  • Together with the cullin protein ANAPC2, constitutes the catalytic component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of Lys-11-linked polyubiquitin chains and, to a lower extent, the formation of Lys-48- and Lys-63-linked polyubiquitin chains. May recruit the E2 ubiquitin-conjugating enzymes to the complex.

Gene Wiki entry for ANAPC11 Gene

Additional gene information for ANAPC11 Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANAPC11 Gene

Genomics for ANAPC11 Gene

GeneHancer (GH) Regulatory Elements for ANAPC11 Gene

Promoters and enhancers for ANAPC11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I081888 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 +0.2 206 4.3 PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLR2B ALYREF PIR40053 ANAPC11 HGS CSNK1D ENSG00000260563 TEPSIN LOC105371942 FAAP100 NARF-IT1
GH17I081682 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.4 -206.6 -206636 3.5 PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 SLC30A9 POLR2B ZNF213 ARL16 HGS ALYREF FOXK2 LOC105371942 CCDC137 PDE6G NPLOC4 TSPAN10 P4HB
GH17I082011 Enhancer 0.8 ENCODE 11.5 +122.7 122668 3.3 ELF3 SOX13 CTCF TFAP4 SAP130 ZNF449 ZIC2 RAD21 THRB RARA CENPX DCXR ASPSCR1 MYADML2 ENSG00000235296 PYCR1 MAFG SIRT7 PCYT2 NPB
GH17I081984 Enhancer 0.7 FANTOM5 11.7 +94.1 94119 0.2 KLF1 MXI1 ZSCAN4 INSM2 GLI4 CDC5L ZNF2 ZFHX2 POLR2A EGR1 MYADML2 PYCR1 ENSG00000235296 MAFG SIRT7 PCYT2 NPB ALYREF ANAPC11 DCXR
GH17I081980 Enhancer 0.6 ENCODE 11.7 +90.1 90124 1.3 SMARCE1 HDAC1 TEAD4 CBFA2T3 ZEB2 ZIC2 FOXA1 HIC1 GATA3 HDAC2 MYADML2 PYCR1 ENSG00000235296 MAFG SIRT7 PCYT2 NPB ALYREF ANAPC11 DCXR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ANAPC11 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the ANAPC11 gene promoter:

Genomic Locations for ANAPC11 Gene

Genomic Locations for ANAPC11 Gene
chr17:81,890,790-81,900,991
(GRCh38/hg38)
Size:
10,202 bases
Orientation:
Plus strand
chr17:79,848,666-79,858,867
(GRCh37/hg19)

Genomic View for ANAPC11 Gene

Genes around ANAPC11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANAPC11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANAPC11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANAPC11 Gene

Proteins for ANAPC11 Gene

  • Protein details for ANAPC11 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NYG5-APC11_HUMAN
    Recommended name:
    Anaphase-promoting complex subunit 11
    Protein Accession:
    Q9NYG5
    Secondary Accessions:
    • A8MTT2
    • B7ZW64
    • Q502X9
    • Q9BW64
    • Q9P0R2

    Protein attributes for ANAPC11 Gene

    Size:
    84 amino acids
    Molecular mass:
    9841 Da
    Quaternary structure:
    • The mammalian APC/C is composed of 14 distinct subunits that assemble into a complex of at least 19 chains with a combined molecular mass of around 1.2 MDa. Interacts with the cullin domain of ANAPC2. Interacts with UBE2D2.
    SequenceCaution:
    • Sequence=AAF36134.1; Type=Frameshift; Positions=67; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for ANAPC11 Gene

    Alternative splice isoforms for ANAPC11 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ANAPC11 Gene

Post-translational modifications for ANAPC11 Gene

No data available for DME Specific Peptides for ANAPC11 Gene

Domains & Families for ANAPC11 Gene

Gene Families for ANAPC11 Gene

Protein Domains for ANAPC11 Gene

Suggested Antigen Peptide Sequences for ANAPC11 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9NYG5

UniProtKB/Swiss-Prot:

APC11_HUMAN :
  • The RING-type zinc finger domain coordinates an additional third zinc ion.
  • Belongs to the RING-box family.
Domain:
  • The RING-type zinc finger domain coordinates an additional third zinc ion.
Family:
  • Belongs to the RING-box family.
genes like me logo Genes that share domains with ANAPC11: view

Function for ANAPC11 Gene

Molecular function for ANAPC11 Gene

UniProtKB/Swiss-Prot Function:
Together with the cullin protein ANAPC2, constitutes the catalytic component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of Lys-11-linked polyubiquitin chains and, to a lower extent, the formation of Lys-48- and Lys-63-linked polyubiquitin chains. May recruit the E2 ubiquitin-conjugating enzymes to the complex.

Phenotypes From GWAS Catalog for ANAPC11 Gene

Gene Ontology (GO) - Molecular Function for ANAPC11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004842 contributes_to ubiquitin-protein transferase activity IEA,IDA 11739784
GO:0034450 ubiquitin-ubiquitin ligase activity IDA 10230407
GO:0046872 metal ion binding IEA --
GO:0061630 ubiquitin protein ligase activity IDA 10230407
GO:0097602 cullin family protein binding IDA 10230407
genes like me logo Genes that share ontologies with ANAPC11: view
genes like me logo Genes that share phenotypes with ANAPC11: view

Animal Model Products

CRISPR Products

miRNA for ANAPC11 Gene

miRTarBase miRNAs that target ANAPC11

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ANAPC11 Gene

Localization for ANAPC11 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ANAPC11 Gene

Cytoplasm. Nucleus.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ANAPC11 gene
Compartment Confidence
nucleus 5
cytosol 5
extracellular 3

Subcellular locations from the

Human Protein Atlas (HPA)
  • Nucleoli (4)
  • Nucleoplasm (4)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for ANAPC11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
GO:0005654 nucleoplasm TAS --
GO:0005680 anaphase-promoting complex IDA,IEA 11739784
GO:0005730 nucleolus IDA --
GO:0005737 cytoplasm IEA --
genes like me logo Genes that share ontologies with ANAPC11: view

Pathways & Interactions for ANAPC11 Gene

SuperPathways for ANAPC11 Gene

SuperPathway Contained pathways
1 CDK-mediated phosphorylation and removal of Cdc6
2 APC-Cdc20 mediated degradation of Nek2A
3 Class I MHC mediated antigen processing and presentation
4 Cell Cycle, Mitotic
.60
5 Cellular Senescence (REACTOME)
genes like me logo Genes that share pathways with ANAPC11: view

UniProtKB/Swiss-Prot Q9NYG5-APC11_HUMAN

  • Pathway: Protein modification; protein ubiquitination.

Gene Ontology (GO) - Biological Process for ANAPC11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000278 mitotic cell cycle TAS 11739784
GO:0007049 cell cycle IEA --
GO:0016567 protein ubiquitination IEA,IDA 11739784
GO:0031145 anaphase-promoting complex-dependent catabolic process TAS --
GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process TAS --
genes like me logo Genes that share ontologies with ANAPC11: view

No data available for SIGNOR curated interactions for ANAPC11 Gene

Drugs & Compounds for ANAPC11 Gene

(1) Drugs for ANAPC11 Gene - From: ApexBio

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
TAME Pharma 0

(1) ApexBio Compounds for ANAPC11 Gene

Compound Action Cas Number
TAME 901-47-3
genes like me logo Genes that share compounds with ANAPC11: view

Drug Products

Transcripts for ANAPC11 Gene

Unigene Clusters for ANAPC11 Gene

Anaphase promoting complex subunit 11:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANAPC11 Gene

ExUns: 1 ^ 2a · 2b · 2c · 2d · 2e · 2f ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6a · 6b · 6c · 6d ^ 7 ^ 8a · 8b · 8c · 8d · 8e · 8f
SP1: - - - - - - - -
SP2: - - - - - - - - -
SP3: - - - - - - - - - - - - - -
SP4: - - - - - - - - -
SP5: - - - - - - - - - -
SP6: - - - - - - - -
SP7: - - - - - - - -
SP8: - - - - -
SP9: - - - -
SP10: - - - - - - - - - - -
SP11: - - - - - -
SP12: - - - - - - - - - -
SP13: - - - - - - - - -
SP14: - - - - -
SP15: - - - - - - - - -
SP16: - - - - - -
SP17: - - -

Relevant External Links for ANAPC11 Gene

GeneLoc Exon Structure for
ANAPC11
ECgene alternative splicing isoforms for
ANAPC11

Expression for ANAPC11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ANAPC11 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for ANAPC11 Gene

This gene is overexpressed in Bone (56.3) and Lung (12.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for ANAPC11 Gene



Protein tissue co-expression partners for ANAPC11 Gene

NURSA nuclear receptor signaling pathways regulating expression of ANAPC11 Gene:

ANAPC11

SOURCE GeneReport for Unigene cluster for ANAPC11 Gene:

Hs.534456

mRNA Expression by UniProt/SwissProt for ANAPC11 Gene:

Q9NYG5-APC11_HUMAN
Tissue specificity: Expressed at high levels in skeletal muscle and heart; in moderate levels in brain, kidney, and liver; and at low levels in colon, thymus, spleen, small intestine, placenta, lung and peripheral blood leukocyte.

Evidence on tissue expression from TISSUES for ANAPC11 Gene

  • Nervous system(4.8)
  • Blood(4.3)
  • Skin(4.3)
  • Lung(2.7)
  • Muscle(2.2)
genes like me logo Genes that share expression patterns with ANAPC11: view

No data available for mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANAPC11 Gene

Orthologs for ANAPC11 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for ANAPC11 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ANAPC11 33 34
  • 99.21 (n)
dog
(Canis familiaris)
Mammalia ANAPC11 33 34
  • 93.25 (n)
cow
(Bos Taurus)
Mammalia ANAPC11 33 34
  • 92.86 (n)
mouse
(Mus musculus)
Mammalia Anapc11 33 16 34
  • 89.29 (n)
rat
(Rattus norvegicus)
Mammalia Anapc11 33
  • 89.29 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia ANAPC11 34
  • 42 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia anapc11 33
  • 82.14 (n)
zebrafish
(Danio rerio)
Actinopterygii anapc11 33 34
  • 79.37 (n)
fruit fly
(Drosophila melanogaster)
Insecta lmgA 33
  • 74.7 (n)
lmg 35 34
  • 73 (a)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP008196 33
  • 72.69 (n)
worm
(Caenorhabditis elegans)
Secernentea apc-11 34
  • 16 (a)
OneToOne
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_AER016C 33
  • 59.92 (n)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes APC11 33 34 36
  • 54.76 (n)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0E17711g 33
  • 49.21 (n)
thale cress
(Arabidopsis thaliana)
eudicotyledons APC11 33
  • 61.79 (n)
rice
(Oryza sativa)
Liliopsida Os07g0411101 33
  • 69.88 (n)
bread mold
(Neurospora crassa)
Ascomycetes NCU11300 33
  • 64.91 (n)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes apc11 33
  • 54.58 (n)
Species where no ortholog for ANAPC11 was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for ANAPC11 Gene

ENSEMBL:
Gene Tree for ANAPC11 (if available)
TreeFam:
Gene Tree for ANAPC11 (if available)

Paralogs for ANAPC11 Gene

(12) SIMAP similar genes for ANAPC11 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with ANAPC11: view

No data available for Paralogs for ANAPC11 Gene

Variants for ANAPC11 Gene

Sequence variations from dbSNP and Humsavar for ANAPC11 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000030905 -- 81,895,528(+) G/A intron_variant
rs1000144064 -- 81,892,449(+) A/G intron_variant
rs1000204782 -- 81,898,743(+) GTTTTAATTTAAAAAAATG/G intron_variant
rs1000262493 -- 81,893,374(+) G/C intron_variant
rs1000372449 -- 81,898,394(+) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ANAPC11 Gene

Variant ID Type Subtype PubMed ID
esv21913 CNV gain+loss 19812545
esv29964 CNV loss 17803354
esv33468 CNV loss 17666407
esv33475 CNV gain+loss 17666407
nsv1070854 CNV deletion 25765185
nsv1118775 CNV deletion 24896259
nsv428351 CNV gain 18775914
nsv470620 CNV loss 18288195
nsv833569 CNV loss 17160897
nsv952392 CNV deletion 24416366

Variation tolerance for ANAPC11 Gene

Residual Variation Intolerance Score: 64.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.71; 15.01% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ANAPC11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANAPC11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANAPC11 Gene

Disorders for ANAPC11 Gene

Additional Disease Information for ANAPC11

No disorders were found for ANAPC11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANAPC11 Gene

Publications for ANAPC11 Gene

  1. Molecular cloning and characterization of a RING-H2 finger protein, ANAPC11, the human homolog of yeast Apc11p. (PMID: 11573242) Chan AH … Tsui SK (Journal of cellular biochemistry 2001) 3 4 22 58
  2. The RING-H2 finger protein APC11 and the E2 enzyme UBC4 are sufficient to ubiquitinate substrates of the anaphase-promoting complex. (PMID: 10922056) Gmachl M … Peters JM (Proceedings of the National Academy of Sciences of the United States of America 2000) 2 3 4 58
  3. RING E3 mechanism for ubiquitin ligation to a disordered substrate visualized for human anaphase-promoting complex. (PMID: 25825779) Brown NG … Schulman BA (Proceedings of the National Academy of Sciences of the United States of America 2015) 2 3 58
  4. Molecular architecture and mechanism of the anaphase-promoting complex. (PMID: 25043029) Chang LF … Barford D (Nature 2014) 3 4 58
  5. Mechanism of ubiquitin-chain formation by the human anaphase-promoting complex. (PMID: 18485873) Jin L … Rape M (Cell 2008) 3 4 58

Products for ANAPC11 Gene

Sources for ANAPC11 Gene

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