Aliases for AMZ2P1 Gene

Aliases for AMZ2P1 Gene

  • Archaelysin Family Metallopeptidase 2 Pseudogene 1 2 3 5
  • Putative Archaemetzincin-2-Like Protein 3

External Ids for AMZ2P1 Gene

Previous GeneCards Identifiers for AMZ2P1 Gene

  • GC17M062963
  • GC17M058355

Summaries for AMZ2P1 Gene

GeneCards Summary for AMZ2P1 Gene

AMZ2P1 (Archaelysin Family Metallopeptidase 2 Pseudogene 1) is a Pseudogene.

Additional gene information for AMZ2P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AMZ2P1 Gene

Genomics for AMZ2P1 Gene

GeneHancer (GH) Regulatory Elements for AMZ2P1 Gene

Promoters and enhancers for AMZ2P1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AMZ2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AMZ2P1 Gene

Genomic Locations for AMZ2P1 Gene
chr17:64,966,550-64,975,585
(GRCh38/hg38)
Size:
9,036 bases
Orientation:
Minus strand
chr17:62,962,668-62,971,703
(GRCh37/hg19)
Size:
9,036 bases
Orientation:
Minus strand

Genomic View for AMZ2P1 Gene

Genes around AMZ2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AMZ2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AMZ2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AMZ2P1 Gene

Proteins for AMZ2P1 Gene

Post-translational modifications for AMZ2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AMZ2P1 Gene

Domains & Families for AMZ2P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AMZ2P1 Gene

Function for AMZ2P1 Gene

Phenotypes From GWAS Catalog for AMZ2P1 Gene

Phenotypes for AMZ2P1 Gene

genes like me logo Genes that share phenotypes with AMZ2P1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AMZ2P1 Gene

Localization for AMZ2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AMZ2P1 Gene

Pathways & Interactions for AMZ2P1 Gene

PathCards logo

SuperPathways for AMZ2P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AMZ2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AMZ2P1 Gene

Drugs & Compounds for AMZ2P1 Gene

No Compound Related Data Available

Transcripts for AMZ2P1 Gene

mRNA/cDNA for AMZ2P1 Gene

(1) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(109) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for AMZ2P1 Gene

No ASD Table

Relevant External Links for AMZ2P1 Gene

GeneLoc Exon Structure for
AMZ2P1
ECgene alternative splicing isoforms for
AMZ2P1

Expression for AMZ2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for AMZ2P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of AMZ2P1 Gene:

AMZ2P1

SOURCE GeneReport for Unigene cluster for AMZ2P1 Gene:

Hs.396447
genes like me logo Genes that share expression patterns with AMZ2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AMZ2P1 Gene

Orthologs for AMZ2P1 Gene

Evolution for AMZ2P1 Gene

ENSEMBL:
Gene Tree for AMZ2P1 (if available)
TreeFam:
Gene Tree for AMZ2P1 (if available)

No data available for Orthologs for AMZ2P1 Gene

Paralogs for AMZ2P1 Gene

No data available for Paralogs for AMZ2P1 Gene

Variants for AMZ2P1 Gene

Sequence variations from dbSNP and Humsavar for AMZ2P1 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000354728 -- 64,971,303(-) T/C intron_variant
rs1000501208 -- 64,967,041(-) A/G/T non_coding_transcript_variant
rs1000964855 -- 64,972,850(-) G/A non_coding_transcript_variant
rs1001102889 -- 64,973,210(-) C/T intron_variant
rs1001501365 -- 64,968,454(-) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for AMZ2P1 Gene

Variant ID Type Subtype PubMed ID
dgv3274n100 CNV gain 25217958
dgv45n68 CNV loss 17160897
nsv1066765 CNV gain 25217958
nsv1120054 OTHER inversion 24896259
nsv960522 CNV duplication 23825009

Additional Variant Information for AMZ2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AMZ2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for AMZ2P1 Gene

Disorders for AMZ2P1 Gene

Additional Disease Information for AMZ2P1

No disorders were found for AMZ2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AMZ2P1 Gene

Publications for AMZ2P1 Gene

  1. Charting the landscape of tandem BRCT domain-mediated protein interactions. (PMID: 22990118) Woods NT … Monteiro AN (Science signaling 2012) 3 56
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 56
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

Products for AMZ2P1 Gene

Sources for AMZ2P1 Gene