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Aliases for AMOT Gene

Aliases for AMOT Gene

  • Angiomotin 2 3 3 5
  • Angiomotin P130 Isoform 3
  • Angiomotin P80 Isoform 3
  • KIAA1071 4

External Ids for AMOT Gene

Previous GeneCards Identifiers for AMOT Gene

  • GC0XM107187
  • GC0XM109089
  • GC0XM110042
  • GC0XM110781
  • GC0XM111823
  • GC0XM112017

Summaries for AMOT Gene

Entrez Gene Summary for AMOT Gene

  • This gene belongs to the motin family of angiostatin binding proteins characterized by conserved coiled-coil domains and C-terminal PDZ binding motifs. The encoded protein is expressed predominantly in endothelial cells of capillaries as well as larger vessels of the placenta where it may mediate the inhibitory effect of angiostatin on tube formation and the migration of endothelial cells toward growth factors during the formation of new blood vessels. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]

GeneCards Summary for AMOT Gene

AMOT (Angiomotin) is a Protein Coding gene. Diseases associated with AMOT include Papilloma. Among its related pathways are Signaling by Hippo and Hippo signaling pathway. Gene Ontology (GO) annotations related to this gene include receptor activity and angiostatin binding. An important paralog of this gene is AMOTL1.

UniProtKB/Swiss-Prot for AMOT Gene

  • Plays a central role in tight junction maintenance via the complex formed with ARHGAP17, which acts by regulating the uptake of polarity proteins at tight junctions. Appears to regulate endothelial cell migration and tube formation. May also play a role in the assembly of endothelial cell-cell junctions.

Gene Wiki entry for AMOT Gene

Additional gene information for AMOT Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AMOT Gene

Genomics for AMOT Gene

GeneHancer (GH) Regulatory Elements for AMOT Gene

Promoters and enhancers for AMOT Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI112839 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE 569.2 -0.1 -78 2.6 PKNOX1 FEZF1 YY1 ZNF335 GLIS2 ZNF366 SCRT2 KLF7 FOS RUNX3 AMOT PIR62359 RN7SL266P GC0XP112625
GH0XI112823 Promoter 0.5 EPDnew 550.4 +17.7 17732 0.1 AMOT PIR62359 MIR4329 GC0XP112625
GH0XI112850 Enhancer 0.8 ENCODE 16.8 -10.3 -10264 1.9 PKNOX1 BATF ZNF143 KLF7 ETV6 BCLAF1 IKZF2 RUNX3 EGR2 SMARCA5 AMOT RN7SL266P GC0XP112625
GH0XI112678 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 6.7 +161.2 161207 2.8 ZSCAN4 EBF1 E2F1 POLR2A NFATC1 ZSCAN29 IKZF2 RUNX3 TCF7L2 ZNF639 LHFPL1 AMOT ENSG00000200436 GC0XP112625
GH0XI112818 Enhancer 0.6 Ensembl ENCODE 13.4 +21.6 21569 1.2 USF1 ZIC2 ZBTB17 AMOT PIR62359 MIR4329 GC0XP112625
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around AMOT on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the AMOT gene promoter:

Genomic Locations for AMOT Gene

Genomic Locations for AMOT Gene
chrX:112,774,503-112,840,961
(GRCh38/hg38)
Size:
66,459 bases
Orientation:
Minus strand
chrX:112,017,731-112,084,043
(GRCh37/hg19)

Genomic View for AMOT Gene

Genes around AMOT on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AMOT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AMOT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AMOT Gene

Proteins for AMOT Gene

  • Protein details for AMOT Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q4VCS5-AMOT_HUMAN
    Recommended name:
    Angiomotin
    Protein Accession:
    Q4VCS5
    Secondary Accessions:
    • Q504X5
    • Q9HD27
    • Q9UPT1

    Protein attributes for AMOT Gene

    Size:
    1084 amino acids
    Molecular mass:
    118085 Da
    Quaternary structure:
    • Component of a complex whose core is composed of ARHGAP17, AMOT, MPP5/PALS1, PATJ and PARD3/PAR3. Interacts with MAGI1. Isoform 1 interacts with angiostatin.
    Miscellaneous:
    • Motus means motility in Latin.
    SequenceCaution:
    • Sequence=AAH94712.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305};

    Alternative splice isoforms for AMOT Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for AMOT Gene

Post-translational modifications for AMOT Gene

  • Polyubiquitinated by NEDD4, NEDD4L and ITCH, leading to proteasomal degradation.
  • Ubiquitination at posLast=9494, posLast=113113, and posLast=219219
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for AMOT Gene

Domains & Families for AMOT Gene

Gene Families for AMOT Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for AMOT Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for AMOT Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q4VCS5

UniProtKB/Swiss-Prot:

AMOT_HUMAN :
  • The coiled coil domain interacts directly with the BAR domain of ARHGAP17.
  • Belongs to the angiomotin family.
Domain:
  • The coiled coil domain interacts directly with the BAR domain of ARHGAP17.
  • The angiostatin binding domain (871-1005) allows the binding to angiostatin.
Family:
  • Belongs to the angiomotin family.
genes like me logo Genes that share domains with AMOT: view

Function for AMOT Gene

Molecular function for AMOT Gene

UniProtKB/Swiss-Prot Function:
Plays a central role in tight junction maintenance via the complex formed with ARHGAP17, which acts by regulating the uptake of polarity proteins at tight junctions. Appears to regulate endothelial cell migration and tube formation. May also play a role in the assembly of endothelial cell-cell junctions.

Gene Ontology (GO) - Molecular Function for AMOT Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004872 receptor activity IDA 11257124
GO:0005515 protein binding IPI 11257124
GO:0043532 angiostatin binding IDA 11257124
genes like me logo Genes that share ontologies with AMOT: view
genes like me logo Genes that share phenotypes with AMOT: view

Animal Models for AMOT Gene

MGI Knock Outs for AMOT:

Clone Products

  • Addgene plasmids for AMOT

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for AMOT Gene

Localization for AMOT Gene

Subcellular locations from UniProtKB/Swiss-Prot for AMOT Gene

Cell junction, tight junction. Note=Localized on the cell surface. May act as a transmembrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for AMOT gene
Compartment Confidence
plasma membrane 5
cytoskeleton 5
cytosol 5
nucleus 3
extracellular 1
mitochondrion 1
peroxisome 1
endosome 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cell Junctions (3)
  • Nucleus (1)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for AMOT Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001726 ruffle IDA 11257124
GO:0005634 nucleus IDA --
GO:0005829 cytosol TAS --
GO:0005884 actin filament IDA 11257124
GO:0005923 bicellular tight junction IEA --
genes like me logo Genes that share ontologies with AMOT: view

Pathways & Interactions for AMOT Gene

genes like me logo Genes that share pathways with AMOT: view

Pathways by source for AMOT Gene

2 Reactome pathways for AMOT Gene
2 KEGG pathways for AMOT Gene
2 Cell Signaling Technology pathways for AMOT Gene

SIGNOR curated interactions for AMOT Gene

Inactivates:

Gene Ontology (GO) - Biological Process for AMOT Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001570 vasculogenesis IEA --
GO:0001701 in utero embryonic development IEA --
GO:0001702 gastrulation with mouth forming second IEA --
GO:0003365 establishment of cell polarity involved in ameboidal cell migration IEA --
GO:0006935 chemotaxis IEA --
genes like me logo Genes that share ontologies with AMOT: view

Drugs & Compounds for AMOT Gene

No Compound Related Data Available

Transcripts for AMOT Gene

Unigene Clusters for AMOT Gene

Angiomotin:
Representative Sequences:

Clone Products

  • Addgene plasmids for AMOT

Alternative Splicing Database (ASD) splice patterns (SP) for AMOT Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4a · 4b · 4c ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16
SP1:
SP2:
SP3:
SP4:
SP5: - - - - - -
SP6:
SP7: -
SP8:

Relevant External Links for AMOT Gene

GeneLoc Exon Structure for
AMOT
ECgene alternative splicing isoforms for
AMOT

Expression for AMOT Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for AMOT Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for AMOT Gene

This gene is overexpressed in Muscle - Skeletal (x4.4).

Protein differential expression in normal tissues from HIPED for AMOT Gene

This gene is overexpressed in Bone marrow mesenchymal stem cell (45.4) and Blymphocyte (6.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for AMOT Gene



NURSA nuclear receptor signaling pathways regulating expression of AMOT Gene:

AMOT

SOURCE GeneReport for Unigene cluster for AMOT Gene:

Hs.528051

mRNA Expression by UniProt/SwissProt for AMOT Gene:

Q4VCS5-AMOT_HUMAN
Tissue specificity: Expressed in placenta and skeletal muscle. Found in the endothelial cells of capillaries as well as larger vessels of the placenta.

Evidence on tissue expression from TISSUES for AMOT Gene

  • Nervous system(4.4)
genes like me logo Genes that share expression patterns with AMOT: view

No data available for Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for AMOT Gene

Orthologs for AMOT Gene

This gene was present in the common ancestor of animals.

Orthologs for AMOT Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia AMOT 33 34
  • 99.55 (n)
cow
(Bos Taurus)
Mammalia AMOT 33 34
  • 92.46 (n)
dog
(Canis familiaris)
Mammalia AMOT 33 34
  • 91.15 (n)
mouse
(Mus musculus)
Mammalia Amot 33 16 34
  • 87.56 (n)
rat
(Rattus norvegicus)
Mammalia Amot 33
  • 87.51 (n)
oppossum
(Monodelphis domestica)
Mammalia AMOT 34
  • 69 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia AMOT 34
  • 66 (a)
OneToOne
chicken
(Gallus gallus)
Aves AMOT 33 34
  • 75.61 (n)
lizard
(Anolis carolinensis)
Reptilia AMOT 34
  • 72 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia amot 33
  • 68.94 (n)
zebrafish
(Danio rerio)
Actinopterygii amot 33 34
  • 64.53 (n)
worm
(Caenorhabditis elegans)
Secernentea F59C12.3 34
  • 20 (a)
OneToMany
Species where no ortholog for AMOT was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for AMOT Gene

ENSEMBL:
Gene Tree for AMOT (if available)
TreeFam:
Gene Tree for AMOT (if available)

Paralogs for AMOT Gene

Paralogs for AMOT Gene

(2) SIMAP similar genes for AMOT Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with AMOT: view

Variants for AMOT Gene

Sequence variations from dbSNP and Humsavar for AMOT Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs869312862 likely-pathogenic, Cerebral visual impairment and intellectual disability 112,791,832(-) C/G coding_sequence_variant, missense_variant
rs1000229454 -- 112,835,097(-) T/C genic_upstream_transcript_variant, intron_variant
rs1000485035 -- 112,800,185(-) C/T intron_variant
rs1000520564 -- 112,797,736(-) G/A intron_variant
rs1000551512 -- 112,807,803(-) A/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for AMOT Gene

Variant ID Type Subtype PubMed ID
esv3361732 OTHER inversion 20981092
esv3574314 CNV loss 25503493

Variation tolerance for AMOT Gene

Residual Variation Intolerance Score: 20.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.74; 57.72% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for AMOT Gene

Human Gene Mutation Database (HGMD)
AMOT
SNPedia medical, phenotypic, and genealogical associations of SNPs for
AMOT

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for AMOT Gene

Disorders for AMOT Gene

MalaCards: The human disease database

(1) MalaCards diseases for AMOT Gene - From: HGMD, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
papilloma
  • papillomatosis
- elite association - COSMIC cancer census association via MalaCards
Search AMOT in MalaCards View complete list of genes associated with diseases

Additional Disease Information for AMOT

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
genes like me logo Genes that share disorders with AMOT: view

No data available for UniProtKB/Swiss-Prot and Genatlas for AMOT Gene

Publications for AMOT Gene

  1. Angiomotin: an angiostatin binding protein that regulates endothelial cell migration and tube formation. (PMID: 11257124) Troyanovsky B … Holmgren L (The Journal of cell biology 2001) 2 3 4 22 58
  2. A Rich1/Amot complex regulates the Cdc42 GTPase and apical-polarity proteins in epithelial cells. (PMID: 16678097) Wells CD … Pawson T (Cell 2006) 3 4 22 58
  3. Angiomotin regulates endothelial cell-cell junctions and cell motility. (PMID: 16043488) Bratt A … Holmgren L (The Journal of biological chemistry 2005) 2 3 4 58
  4. Angiomotin belongs to a novel protein family with conserved coiled-coil and PDZ binding domains. (PMID: 12406577) Bratt A … Meir EG (Gene 2002) 2 3 22 58
  5. The Nedd4-like ubiquitin E3 ligases target angiomotin/p130 to ubiquitin-dependent degradation. (PMID: 22385262) Wang C … Yu L (The Biochemical journal 2012) 3 4 58

Products for AMOT Gene

  • Addgene plasmids for AMOT

Sources for AMOT Gene

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