Aliases for AMD1P1 Gene

Aliases for AMD1P1 Gene

  • Adenosylmethionine Decarboxylase 1 Pseudogene 1 2 3 5
  • AMD1P1 5

External Ids for AMD1P1 Gene

Previous GeneCards Identifiers for AMD1P1 Gene

  • GC10P020639

Summaries for AMD1P1 Gene

GeneCards Summary for AMD1P1 Gene

AMD1P1 (Adenosylmethionine Decarboxylase 1 Pseudogene 1) is a Pseudogene.

Additional gene information for AMD1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AMD1P1 Gene

Genomics for AMD1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AMD1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J020350 Enhancer 0.5 Ensembl 600.7 +1.2 1152 0.8 ATF7 CREB1 ATF2 ATF3 JUND JUN AMD1P1 lnc-PLXDC2-3 piR-50443-036 PLXDC2 NEBL
GH10J021297 Enhancer 0.9 ENCODE dbSUPER 36.4 +947.7 947684 0.9 RNF2 ATF7 ZNF629 ZNF512 IKZF1 PRDM1 MTA2 ZIC2 PATZ1 IKZF2 MLLT10 AMD1P1 RNU6-15P DNAJC1 MG828467 NEBL piR-45035-024
GH10J021069 Enhancer 0.6 Ensembl 10.8 +720.1 720052 1.4 ZIC2 OSR2 ZBTB11 RCOR1 PRDM6 GLIS1 TRIM28 CHD2 GATA2 ZBTB6 MLLT10 AMD1P1 ENSG00000204683 RNU6-15P piR-43107-033 EIF4BP2 NEBL
GH10J020372 Enhancer 0.6 Ensembl ENCODE 0.4 +23.0 22950 0.8 YY1 NANOG POU5F1 piR-50443-036 AMD1P1 lnc-PLXDC2-3 PLXDC2 NEBL
GH10J020369 Enhancer 0.5 ENCODE 0.4 +20.5 20466 2.1 CTCF YY1 POLR2A NFIB BACH1 MAFK piR-50443-036 AMD1P1 lnc-PLXDC2-3 PLXDC2 NEBL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AMD1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AMD1P1 Gene

Genomic Locations for AMD1P1 Gene
chr10:20,350,049-20,351,100
(GRCh38/hg38)
Size:
1,052 bases
Orientation:
Plus strand
chr10:20,638,978-20,640,029
(GRCh37/hg19)
Size:
1,052 bases
Orientation:
Plus strand

Genomic View for AMD1P1 Gene

Genes around AMD1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AMD1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AMD1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AMD1P1 Gene

Proteins for AMD1P1 Gene

Post-translational modifications for AMD1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AMD1P1 Gene

Domains & Families for AMD1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AMD1P1 Gene

Function for AMD1P1 Gene

Phenotypes From GWAS Catalog for AMD1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AMD1P1 Gene

Localization for AMD1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AMD1P1 Gene

Pathways & Interactions for AMD1P1 Gene

PathCards logo

SuperPathways for AMD1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AMD1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AMD1P1 Gene

Drugs & Compounds for AMD1P1 Gene

No Compound Related Data Available

Transcripts for AMD1P1 Gene

mRNA/cDNA for AMD1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for AMD1P1 Gene

No ASD Table

Relevant External Links for AMD1P1 Gene

GeneLoc Exon Structure for
AMD1P1

Expression for AMD1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for AMD1P1 Gene

genes like me logo Genes that share expression patterns with AMD1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AMD1P1 Gene

Orthologs for AMD1P1 Gene

Evolution for AMD1P1 Gene

ENSEMBL:
Gene Tree for AMD1P1 (if available)
TreeFam:
Gene Tree for AMD1P1 (if available)

No data available for Orthologs for AMD1P1 Gene

Paralogs for AMD1P1 Gene

No data available for Paralogs for AMD1P1 Gene

Variants for AMD1P1 Gene

Additional Variant Information for AMD1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AMD1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for AMD1P1 Gene

Disorders for AMD1P1 Gene

No disorders were found for AMD1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AMD1P1 Gene

Publications for AMD1P1 Gene

No publications were found for AMD1P1 Gene.

Products for AMD1P1 Gene

Sources for AMD1P1 Gene