Aliases for ALKBH3-AS1 Gene
Subcategory (RNA class) for ALKBH3-AS1 Gene
non-coding RNA
Quality Score for this RNA gene is
13
External Ids for ALKBH3-AS1 Gene
- HGNC: 48670
- Entrez Gene: 100507300
- Ensembl: ENSG00000244926
Summaries for ALKBH3-AS1 Gene
GeneCards Summary for ALKBH3-AS1 Gene
ALKBH3-AS1 (ALKBH3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.
Additional gene information for ALKBH3-AS1 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ALKBH3-AS1 Gene
Genomics for ALKBH3-AS1 Gene
GeneHancer (GH) Regulatory Elements for ALKBH3-AS1 Gene
Promoters and enhancers for ALKBH3-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around ALKBH3-AS1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for ALKBH3-AS1 Gene
Genomic Locations for ALKBH3-AS1 Gene
- chr11:43,909,289-43,920,944
- (GRCh38/hg38)
- Size:
- 11,656 bases
- Orientation:
- Minus strand
- chr11:43,930,839-43,942,494
- (GRCh37/hg19)
- Size:
- 11,656 bases
- Orientation:
- Minus strand
Genomic View for ALKBH3-AS1 Gene
Genes around ALKBH3-AS1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11p11.2 by Entrez Gene
- 11p11.2 by HGNC
- 11p11.2 by Ensembl
ALKBH3-AS1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ALKBH3-AS1 Gene
Proteins for ALKBH3-AS1 Gene
Post-translational modifications for ALKBH3-AS1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for ALKBH3-AS1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ALKBH3-AS1
- Origene Custom Protein Services for ALKBH3-AS1
- Search GeneTex for Proteins for ALKBH3-AS1
No data available for DME Specific Peptides for ALKBH3-AS1 Gene
Domains & Families for ALKBH3-AS1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ALKBH3-AS1 Gene
Function for ALKBH3-AS1 Gene
Phenotypes From GWAS Catalog for ALKBH3-AS1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for ALKBH3-AS1
-
miRNA Products
Inhibitory RNA Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ALKBH3-AS1 Gene
Localization for ALKBH3-AS1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ALKBH3-AS1 Gene
Transcripts for ALKBH3-AS1 Gene
mRNA/cDNA for ALKBH3-AS1 Gene
- (4) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000499194 1906 bps (uc001mxu.4)
- ENST00000528285 450 bps (uc058apm.1)
- ENST00000534287 542 bps (uc058apn.1)
- ENST00000527960 547 bps (uc058apo.1)
- (5) RNA Central transcripts :
CRISPR Products
- Browse CRISPR knockouts for ALKBH3-AS1
miRNA Products
Inhibitory RNA Products
Relevant External Links for ALKBH3-AS1 Gene
- GeneLoc Exon Structure for
- ALKBH3-AS1
- ECgene alternative splicing isoforms for
- ALKBH3-AS1
Expression for ALKBH3-AS1 Gene
mRNA differential expression in normal tissues according to GTEx for ALKBH3-AS1 Gene
This gene is overexpressed in Testis (x17.9).
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ALKBH3-AS1 Gene
Orthologs for ALKBH3-AS1 Gene
No data available for Orthologs for ALKBH3-AS1 Gene
Paralogs for ALKBH3-AS1 Gene
No data available for Paralogs for ALKBH3-AS1 Gene
Variants for ALKBH3-AS1 Gene
| SNP ID | Clin | Chr 11 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000186486 | -- | 43,919,366(-) | C/G | intron_variant | |
| rs1000266609 | -- | 43,916,552(-) | G/T | intron_variant | |
| rs1000326399 | -- | 43,909,425(-) | C/A/T | non_coding_transcript_variant | |
| rs1000564751 | -- | 43,922,903(-) | A/C | upstream_transcript_variant | |
| rs1000611439 | -- | 43,909,633(-) | G/C | non_coding_transcript_variant |
Additional Variant Information for ALKBH3-AS1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ALKBH3-AS1
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ALKBH3-AS1 Gene
Disorders for ALKBH3-AS1 Gene
Additional Disease Information for ALKBH3-AS1
No disorders were found for ALKBH3-AS1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ALKBH3-AS1 Gene
Publications for ALKBH3-AS1 Gene
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
Products for ALKBH3-AS1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ALKBH3-AS1
- Origene Custom Protein Services for ALKBH3-AS1
- Browse OriGene Inhibitory RNA Products For ALKBH3-AS1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ALKBH3-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ALKBH3-AS1
- GenScript: Custom all cDNA clones Services for ALKBH3-AS1
- GenScript Custom Purified and Recombinant Proteins Services for ALKBH3-AS1
- GenScript Custom Assay Services for ALKBH3-AS1
- GenScript Custom overexpressing Cell Line Services for ALKBH3-AS1
- Browse GenScript CRISPR for ALKBH3-AS1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for ALKBH3-AS1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Search GeneTex for Antibodies for ALKBH3-AS1
- Search GeneTex for Proteins for ALKBH3-AS1
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ALKBH3-AS1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ALKBH3-AS1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ALKBH3-AS1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ALKBH3-AS1
Sources for ALKBH3-AS1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt