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Aliases for ALG3P1 Gene

Aliases for ALG3P1 Gene

  • ALG3, Alpha-1,3- Mannosyltransferase Pseudogene 1 2 3 5
  • Asparagine-Linked Glycosylation 3, Alpha-1,3- Mannosyltransferase Homolog Pseudogene 3
  • NOT56L Pseudogene 3

External Ids for ALG3P1 Gene

Summaries for ALG3P1 Gene

GeneCards Summary for ALG3P1 Gene

ALG3P1 (ALG3, Alpha-1,3- Mannosyltransferase Pseudogene 1) is a Pseudogene. Diseases associated with ALG3P1 include Congenital Disorder Of Glycosylation, Type Id.

Additional gene information for ALG3P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ALG3P1 Gene

Genomics for ALG3P1 Gene

GeneHancer (GH) Regulatory Elements for ALG3P1 Gene

Promoters and enhancers for ALG3P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J005376 Enhancer 0.3 FANTOM5 650.7 +0.3 327 0.4 CREB1 ALG3P1 ENSG00000250866
GH05J005359 Enhancer 1.1 FANTOM5 ENCODE 0.4 +16.1 16078 2.1 FOXA2 MLX ARID4B DMAP1 YY1 NFKBIZ RXRA MXD4 MIER2 REST ALG3P1 ENSG00000250866
GH05J005373 Enhancer 0.6 Ensembl 0.7 +2.7 2743 0.6 FOSL1 TCF12 ATF1 RFX1 TEAD4 TAL1 CBFA2T3 CBFA2T2 ALG3P1 ENSG00000250866
GH05J005349 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.3 +25.8 25839 2.6 PKNOX1 ATF1 FOXA2 FEZF1 ZNF48 ETS1 GLIS2 ATF7 FOS SMARCB1 ICE1 ALG3P1 ENSG00000250866
GH05J005339 Enhancer 1.2 Ensembl ENCODE 0.3 +36.4 36397 1.5 SIN3A FEZF1 ZNF2 ZNF143 FOS KLF13 DEK SP3 REST SMARCB1 LINC02145 ICE1 ALG3P1 ENSG00000250866
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ALG3P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ALG3P1 Gene

Genomic Locations for ALG3P1 Gene
1,213 bases
Minus strand
1,213 bases
Minus strand

Genomic View for ALG3P1 Gene

Genes around ALG3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ALG3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ALG3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ALG3P1 Gene

Function for ALG3P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ALG3P1 Gene

Localization for ALG3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ALG3P1 Gene

Pathways & Interactions for ALG3P1 Gene

SuperPathways for ALG3P1 Gene

No Data Available

Interacting Proteins for ALG3P1 Gene

Gene Ontology (GO) - Biological Process for ALG3P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ALG3P1 Gene

Drugs & Compounds for ALG3P1 Gene

No Compound Related Data Available

Transcripts for ALG3P1 Gene

mRNA/cDNA for ALG3P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ALG3P1 Gene

No ASD Table

Relevant External Links for ALG3P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ALG3P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ALG3P1 Gene

mRNA differential expression in normal tissues according to GTEx for ALG3P1 Gene

This gene is overexpressed in Brain - Cerebellum (x8.4), Brain - Cerebellar Hemisphere (x6.9), and Testis (x5.1).

NURSA nuclear receptor signaling pathways regulating expression of ALG3P1 Gene:

genes like me logo Genes that share expression patterns with ALG3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ALG3P1 Gene

Orthologs for ALG3P1 Gene

Evolution for ALG3P1 Gene

Gene Tree for ALG3P1 (if available)
Gene Tree for ALG3P1 (if available)

No data available for Orthologs for ALG3P1 Gene

Paralogs for ALG3P1 Gene

No data available for Paralogs for ALG3P1 Gene

Variants for ALG3P1 Gene

Additional Variant Information for ALG3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ALG3P1 Gene

Disorders for ALG3P1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ALG3P1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
congenital disorder of glycosylation, type id
  • cdg1d
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ALG3P1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ALG3P1 Gene

Publications for ALG3P1 Gene

  1. An activated 5' cryptic splice site in the human ALG3 gene generates a premature termination codon insensitive to nonsense-mediated mRNA decay in a new case of congenital disorder of glycosylation type Id (CDG-Id). (PMID: 15108280) Denecke J … Marquardt T (Human mutation 2004) 3 58

Products for ALG3P1 Gene

Sources for ALG3P1 Gene

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