ALG1L3P Gene (Pseudogene)

ALG1 Like 3, Pseudogene

GC04M009705
GIFtS:
6
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Aliases for ALG1L3P Gene

Aliases for ALG1L3P Gene

  • ALG1 Like 3, Pseudogene 2 3 5
  • Asparagine-Linked Glycosylation 1-Like 3, Pseudogene 2 3
  • Asparagine-Linked Glycosylation 1 Homolog Pseudogene 3
  • Asparagine-Linked Glycosylation 1-Like Pseudogene 3
  • Beta-1,4-Mannosyltransferase Pseudogene 3
  • ALG1L3P 5

External Ids for ALG1L3P Gene

Summaries for ALG1L3P Gene

GeneCards Summary for ALG1L3P Gene

ALG1L3P (ALG1 Like 3, Pseudogene) is a Pseudogene.

Additional gene information for ALG1L3P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ALG1L3P Gene

Genomics for ALG1L3P Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for ALG1L3P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH04J009703 Enhancer 0.7 Ensembl ENCODE 0.4 +7.1 7111 1 CTCF ZNF143 REST RAD21 TRIM22 ZNF561 SCRT2 ZBTB40 SCRT1 SKIL piR-54151-005 ENPP7P11 RF00017-4268 ALG1L3P FAM86MP DRD5 DEFB131A
GH04J009707 Enhancer 0.4 Ensembl ENCODE 0.7 +3.1 3110 1.2 ELF1 piR-39904-012 piR-51781-006 FAM86KP OR7E84P ENPP7P11 ALG1L3P DRD5 DEFB131A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ALG1L3P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ALG1L3P Gene

Genomic Locations for ALG1L3P Gene
chr4:9,702,644-9,710,812
(GRCh38/hg38)
Size:
8,169 bases
Orientation:
Minus strand
chr4:9,704,468-9,712,436
(GRCh37/hg19)
Size:
7,969 bases
Orientation:
Minus strand

Genomic View for ALG1L3P Gene

Genes around ALG1L3P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ALG1L3P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ALG1L3P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ALG1L3P Gene

Proteins for ALG1L3P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ALG1L3P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ALG1L3P Gene

Domains & Families for ALG1L3P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ALG1L3P Gene

Function for ALG1L3P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes for ALG1L3P Gene

GenomeRNAi human phenotypes for ALG1L3P:
genes like me logo Genes that share phenotypes with ALG1L3P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ALG1L3P Gene

Localization for ALG1L3P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ALG1L3P Gene

Pathways & Interactions for ALG1L3P Gene

PathCards logo

SuperPathways for ALG1L3P Gene

No Data Available

Gene Ontology (GO) - Biological Process for ALG1L3P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ALG1L3P Gene

Drugs & Compounds for ALG1L3P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ALG1L3P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ALG1L3P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ALG1L3P Gene

No ASD Table

Relevant External Links for ALG1L3P Gene

GeneLoc Exon Structure for
ALG1L3P

Expression for ALG1L3P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ALG1L3P Gene

mRNA expression in normal human tissues for ALG1L3P Gene
mRNA expression by GTEx for ALG1L3P Gene
genes like me logo Genes that share expression patterns with ALG1L3P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ALG1L3P Gene

Orthologs for ALG1L3P Gene

Evolution for ALG1L3P Gene

ENSEMBL:
Gene Tree for ALG1L3P (if available)
TreeFam:
Gene Tree for ALG1L3P (if available)

No data available for Orthologs for ALG1L3P Gene

Paralogs for ALG1L3P Gene

No data available for Paralogs for ALG1L3P Gene

Variants for ALG1L3P Gene

Additional Variant Information for ALG1L3P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ALG1L3P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ALG1L3P Gene

Disorders for ALG1L3P Gene

No disorders were found for ALG1L3P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ALG1L3P Gene

Publications for ALG1L3P Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3

ExternalLinks

View latest publications for ALG1L3P gene in Mastermind

Products for ALG1L3P Gene

Sources for ALG1L3P Gene