Aliases for ALG1L12P Gene

Aliases for ALG1L12P Gene

  • ALG1 Like 12, Pseudogene 2 3 5
  • Asparagine-Linked Glycosylation 1-Like 12, Pseudogene 2 3
  • Asparagine-Linked Glycosylation 1, Beta-1,4-Mannosyltransferase Homolog Pseudogene 3
  • Asparagine-Linked Glycosylation 1-Like Pseudogene 3
  • ALG1L12P 5

External Ids for ALG1L12P Gene

Previous GeneCards Identifiers for ALG1L12P Gene

  • GC08P012281

Summaries for ALG1L12P Gene

GeneCards Summary for ALG1L12P Gene

ALG1L12P (ALG1 Like 12, Pseudogene) is a Pseudogene.

Additional gene information for ALG1L12P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ALG1L12P Gene

Genomics for ALG1L12P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ALG1L12P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J012420 Promoter 0.3 Ensembl 600.7 -0.2 -218 0.4 ALG1L12P lnc-FAM86B2-3 lnc-ZNF705D-5 FAM86B2 FAM66A DEFB130A lnc-ZNF705D-7
GH08J012422 Enhancer 0.2 Ensembl 600.7 +1.7 1682 0.2 ALG1L12P piR-54151-007 FAM86B2 lnc-ZNF705D-5 DEFB130A lnc-ZNF705D-7
GH08J013120 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 5.7 +706.8 706810 14.7 CREB1 GATAD2A TEAD4 PRDM10 REST ZNF629 RFX1 IKZF1 CTCF ZNF692 DLC1 ENSG00000255122 RNU6-842P RPS3AP34 ALG1L12P LONRF1 TRMT9B ENSG00000254423 lnc-LONRF1-8 piR-57133-570
GH08J012583 Enhancer 1.1 Ensembl ENCODE 10.4 +166.0 165982 6.8 SP1 GATAD2A KDM1A NFRKB RCOR2 BACH1 LARP7 PRDM1 ZNF143 PHB2 ENSG00000255122 FAM86B2 FAM90A2P FAM86B1 FAM66D ENPP7P6 RPS3AP34 FAM66A ALG1L12P piR-56445-008
GH08J012425 Enhancer 0.2 Ensembl 0.7 +3.6 3611 2.1 piR-54151-007 ALG1L12P FAM86B2 lnc-FAM86B2-1 lnc-ZNF705D-5 DEFB130A lnc-ZNF705D-7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ALG1L12P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ALG1L12P Gene

Genomic Locations for ALG1L12P Gene
chr8:12,421,019-12,426,339
(GRCh38/hg38)
Size:
5,321 bases
Orientation:
Plus strand
chr8:12,278,528-12,283,783
(GRCh37/hg19)
Size:
5,256 bases
Orientation:
Plus strand

Genomic View for ALG1L12P Gene

Genes around ALG1L12P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ALG1L12P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ALG1L12P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ALG1L12P Gene

Proteins for ALG1L12P Gene

Post-translational modifications for ALG1L12P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ALG1L12P Gene

Domains & Families for ALG1L12P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ALG1L12P Gene

Function for ALG1L12P Gene

Phenotypes From GWAS Catalog for ALG1L12P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ALG1L12P Gene

Localization for ALG1L12P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ALG1L12P Gene

Pathways & Interactions for ALG1L12P Gene

PathCards logo

SuperPathways for ALG1L12P Gene

No Data Available

Gene Ontology (GO) - Biological Process for ALG1L12P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ALG1L12P Gene

Drugs & Compounds for ALG1L12P Gene

No Compound Related Data Available

Transcripts for ALG1L12P Gene

mRNA/cDNA for ALG1L12P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ALG1L12P Gene

No ASD Table

Relevant External Links for ALG1L12P Gene

GeneLoc Exon Structure for
ALG1L12P

Expression for ALG1L12P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ALG1L12P Gene

genes like me logo Genes that share expression patterns with ALG1L12P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ALG1L12P Gene

Orthologs for ALG1L12P Gene

Evolution for ALG1L12P Gene

ENSEMBL:
Gene Tree for ALG1L12P (if available)
TreeFam:
Gene Tree for ALG1L12P (if available)

No data available for Orthologs for ALG1L12P Gene

Paralogs for ALG1L12P Gene

No data available for Paralogs for ALG1L12P Gene

Variants for ALG1L12P Gene

Additional Variant Information for ALG1L12P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ALG1L12P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ALG1L12P Gene

Disorders for ALG1L12P Gene

No disorders were found for ALG1L12P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ALG1L12P Gene

Publications for ALG1L12P Gene

No publications were found for ALG1L12P Gene.

Products for ALG1L12P Gene

Sources for ALG1L12P Gene