Aliases for ALG14-AS1 Gene

Subcategory (RNA class) for ALG14-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for ALG14-AS1 Gene

  • ALG14 Antisense RNA 1 2 3
  • Novel Transcript 5
  • NONHSAG002135 94
  • HSALNG0005351 169
  • Lnc-TMEM56-2 170
  • AC095033.1 5

External Ids for ALG14-AS1 Gene

Summaries for ALG14-AS1 Gene

GeneCards Summary for ALG14-AS1 Gene

ALG14-AS1 (ALG14 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with ALG14-AS1 include Myasthenic Syndrome, Congenital, 15.

Additional gene information for ALG14-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ALG14-AS1 Gene

Genomics for ALG14-AS1 Gene

GeneHancer (GH) Regulatory Elements for ALG14-AS1 Gene

Promoters and enhancers for ALG14-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ALG14-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ALG14-AS1 Gene

Genomic Locations for ALG14-AS1 Gene
chr1:95,061,550-95,067,546
(GRCh38/hg38)
Size:
5,997 bases
Orientation:
Plus strand
chr1:95,527,152-95,533,101
(GRCh37/hg19)
Size:
5,950 bases
Orientation:
Plus strand

Genomic View for ALG14-AS1 Gene

Genes around ALG14-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ALG14-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ALG14-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ALG14-AS1 Gene

Proteins for ALG14-AS1 Gene

Post-translational modifications for ALG14-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ALG14-AS1 Gene

Domains & Families for ALG14-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ALG14-AS1 Gene

Function for ALG14-AS1 Gene

Phenotypes From GWAS Catalog for ALG14-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ALG14-AS1 Gene

Localization for ALG14-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ALG14-AS1 Gene

Pathways & Interactions for ALG14-AS1 Gene

PathCards logo

SuperPathways for ALG14-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ALG14-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ALG14-AS1 Gene

Drugs & Compounds for ALG14-AS1 Gene

No Compound Related Data Available

Transcripts for ALG14-AS1 Gene

mRNA/cDNA for ALG14-AS1 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNACentral transcripts :
(1) LncBook transcripts :
(1) LNCipedia transcripts :
(2) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ALG14-AS1 Gene

No ASD Table

Relevant External Links for ALG14-AS1 Gene

GeneLoc Exon Structure for
ALG14-AS1
ECgene alternative splicing isoforms for
ALG14-AS1

Expression for ALG14-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ALG14-AS1 Gene

Orthologs for ALG14-AS1 Gene

Evolution for ALG14-AS1 Gene

ENSEMBL:
Gene Tree for ALG14-AS1 (if available)
TreeFam:
Gene Tree for ALG14-AS1 (if available)

No data available for Orthologs for ALG14-AS1 Gene

Paralogs for ALG14-AS1 Gene

No data available for Paralogs for ALG14-AS1 Gene

Variants for ALG14-AS1 Gene

Sequence variations from dbSNP and Humsavar for ALG14-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs138996965 uncertain-significance, Myasthenic syndrome, congenital, 15 95,064,972(+) T/C intron_variant
rs141065009 benign, Myasthenic syndrome, congenital, 15 95,064,983(+) C/T intron_variant
rs730882050 pathogenic, Myasthenic syndrome, congenital, 15 95,064,960(+) G/A intron_variant
rs769114543 uncertain-significance, not provided, Myasthenic syndrome, congenital, 15 95,064,934(+) C/T intron_variant
rs780277809 uncertain-significance, not provided, Myasthenic syndrome, congenital, 15 95,064,975(+) G/C intron_variant

Additional Variant Information for ALG14-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ALG14-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ALG14-AS1 Gene

Disorders for ALG14-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ALG14-AS1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
myasthenic syndrome, congenital, 15
  • cms15
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ALG14-AS1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ALG14-AS1 Gene

Publications for ALG14-AS1 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 56

No data available for External Links for ALG14-AS1 Gene

Products for ALG14-AS1 Gene

Sources for ALG14-AS1 Gene