Aliases for ALG13-AS1 Gene

Subcategory (RNA class) for ALG13-AS1 Gene


Aliases for ALG13-AS1 Gene

  • ALG13 Antisense RNA 1 2 3 5
  • ALG13 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ALG13-AS1 2 5

External Ids for ALG13-AS1 Gene

Previous GeneCards Identifiers for ALG13-AS1 Gene

  • GC00U933481
  • GC0XM110950

Summaries for ALG13-AS1 Gene

GeneCards Summary for ALG13-AS1 Gene

ALG13-AS1 (ALG13 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ALG13-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ALG13-AS1 Gene

Genomics for ALG13-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ALG13-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ111680 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 12.9 +29.3 29320 2.8 CEBPG HNRNPL CREB1 CTCF PRDM10 ZNF629 IKZF1 POLR2A ZNF692 BACH1 ALG13 HSALNG0139550 piR-60364 ALG13-AS1 TRPC5OS
GH0XJ111695 Enhancer 0.3 Ensembl 0.4 +15.5 15500 1.2 CUX1 HNF4A HSALNG0139550 ALG13-AS1 ALG13 TRPC5OS
GH0XJ111696 Enhancer 0.2 Ensembl 0.4 +13.9 13900 0.8 ALG13-AS1 HSALNG0139550 ALG13 TRPC5OS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ALG13-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ALG13-AS1 Gene

Genomic Locations for ALG13-AS1 Gene
4,453 bases
Minus strand
4,453 bases
Minus strand

Genomic View for ALG13-AS1 Gene

Genes around ALG13-AS1 on UCSC Golden Path with GeneCards custom track
ALG13-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ALG13-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ALG13-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ALG13-AS1 Gene

Proteins for ALG13-AS1 Gene

Post-translational modifications for ALG13-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ALG13-AS1 Gene

Domains & Families for ALG13-AS1 Gene

Gene Families for ALG13-AS1 Gene

genes like me logo Genes that share domains with ALG13-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ALG13-AS1 Gene

Function for ALG13-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ALG13-AS1 Gene

Localization for ALG13-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ALG13-AS1 Gene

Pathways & Interactions for ALG13-AS1 Gene

PathCards logo

SuperPathways for ALG13-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ALG13-AS1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ALG13-AS1 Gene

Drugs & Compounds for ALG13-AS1 Gene

No Compound Related Data Available

Transcripts for ALG13-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ALG13-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000576C61_9606 lncRNA 195 2

HGNC: 41277,

Ensembl: ENST00000430794 (view in UCSC) ,

ALG13-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ALG13-AS1 Gene

1 NCBI additional mRNA sequence :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ALG13-AS1 Gene

No ASD Table

Relevant External Links for ALG13-AS1 Gene

GeneLoc Exon Structure for

Expression for ALG13-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ALG13-AS1 Gene

genes like me logo Genes that share expression patterns with ALG13-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ALG13-AS1 Gene

Orthologs for ALG13-AS1 Gene

Evolution for ALG13-AS1 Gene

Gene Tree for ALG13-AS1 (if available)
Gene Tree for ALG13-AS1 (if available)

No data available for Orthologs for ALG13-AS1 Gene

Paralogs for ALG13-AS1 Gene

No data available for Paralogs for ALG13-AS1 Gene

Variants for ALG13-AS1 Gene

Additional Variant Information for ALG13-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ALG13-AS1 Gene

Disorders for ALG13-AS1 Gene

No disorders were found for ALG13-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ALG13-AS1 Gene

Publications for ALG13-AS1 Gene

  1. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2000) 3

No data available for Mastermind for ALG13-AS1 Gene

Products for ALG13-AS1 Gene

Sources for ALG13-AS1 Gene