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Aliases for ALG13-AS1 Gene

Subcategory (RNA class) for ALG13-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ALG13-AS1 Gene

  • ALG13 Antisense RNA 1 2 3 5
  • ALG13 Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for ALG13-AS1 Gene

Previous GeneCards Identifiers for ALG13-AS1 Gene

  • GC00U933481
  • GC0XM110950

Summaries for ALG13-AS1 Gene

GeneCards Summary for ALG13-AS1 Gene

ALG13-AS1 (ALG13 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ALG13-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ALG13-AS1 Gene

Genomics for ALG13-AS1 Gene

GeneHancer (GH) Regulatory Elements for ALG13-AS1 Gene

Promoters and enhancers for ALG13-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ111680 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 12.8 +29.5 29520 2.4 HDGF CLOCK ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF213 ALG13 PIR55363 ALG13-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ALG13-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ALG13-AS1 Gene

Genomic Locations for ALG13-AS1 Gene
chrX:111,706,649-111,711,101
(GRCh38/hg38)
Size:
4,453 bases
Orientation:
Minus strand
chrX:110,949,877-110,954,329
(GRCh37/hg19)

Genomic View for ALG13-AS1 Gene

Genes around ALG13-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ALG13-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ALG13-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ALG13-AS1 Gene

Proteins for ALG13-AS1 Gene

Post-translational modifications for ALG13-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ALG13-AS1 Gene

Domains & Families for ALG13-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ALG13-AS1 Gene

Function for ALG13-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ALG13-AS1 Gene

Localization for ALG13-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ALG13-AS1 Gene

Pathways & Interactions for ALG13-AS1 Gene

SuperPathways for ALG13-AS1 Gene

No Data Available

Interacting Proteins for ALG13-AS1 Gene

Gene Ontology (GO) - Biological Process for ALG13-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ALG13-AS1 Gene

Drugs & Compounds for ALG13-AS1 Gene

No Compound Related Data Available

Transcripts for ALG13-AS1 Gene

mRNA/cDNA for ALG13-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ALG13-AS1 Gene

No ASD Table

Relevant External Links for ALG13-AS1 Gene

GeneLoc Exon Structure for
ALG13-AS1
ECgene alternative splicing isoforms for
ALG13-AS1

Expression for ALG13-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ALG13-AS1 Gene

genes like me logo Genes that share expression patterns with ALG13-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ALG13-AS1 Gene

Orthologs for ALG13-AS1 Gene

Evolution for ALG13-AS1 Gene

ENSEMBL:
Gene Tree for ALG13-AS1 (if available)
TreeFam:
Gene Tree for ALG13-AS1 (if available)

No data available for Orthologs for ALG13-AS1 Gene

Paralogs for ALG13-AS1 Gene

No data available for Paralogs for ALG13-AS1 Gene

Variants for ALG13-AS1 Gene

Additional Variant Information for ALG13-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ALG13-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ALG13-AS1 Gene

Disorders for ALG13-AS1 Gene

No disorders were found for ALG13-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ALG13-AS1 Gene

Publications for ALG13-AS1 Gene

  1. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2000) 3 58

Products for ALG13-AS1 Gene

Sources for ALG13-AS1 Gene

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