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Aliases for ALDOC Gene

Aliases for ALDOC Gene

  • Aldolase, Fructose-Bisphosphate C 2 3 5
  • Aldolase C, Fructose-Bisphosphate 2 3
  • Brain-Type Aldolase 3 4
  • ALDC 3 4
  • Fructose-1,6-Biphosphate Triosephosphate Lyase 3
  • Fructose-Bisphosphate Aldolase C 3
  • Fructoaldolase C 3
  • EC 4.1.2.13 4
  • Aldolase 3 3

External Ids for ALDOC Gene

Previous GeneCards Identifiers for ALDOC Gene

  • GC17M026745
  • GC17M028799
  • GC17M027045
  • GC17M023924
  • GC17M026900
  • GC17M023109
  • GC17M028576
  • GC17M028578
  • GC17M028669
  • GC17M028763
  • GC17M028808
  • GC17M028913
  • GC17M029006

Summaries for ALDOC Gene

Entrez Gene Summary for ALDOC Gene

  • This gene encodes a member of the class I fructose-biphosphate aldolase gene family. Expressed specifically in the hippocampus and Purkinje cells of the brain, the encoded protein is a glycolytic enzyme that catalyzes the reversible aldol cleavage of fructose-1,6-biphosphate and fructose 1-phosphate to dihydroxyacetone phosphate and either glyceraldehyde-3-phosphate or glyceraldehyde, respectively. [provided by RefSeq, Jul 2008]

GeneCards Summary for ALDOC Gene

ALDOC (Aldolase, Fructose-Bisphosphate C) is a Protein Coding gene. Among its related pathways are Metabolism and Citrate cycle (TCA cycle). Gene Ontology (GO) annotations related to this gene include cytoskeletal protein binding and fructose-bisphosphate aldolase activity. An important paralog of this gene is ENSG00000285043.

Gene Wiki entry for ALDOC Gene

Additional gene information for ALDOC Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ALDOC Gene

Genomics for ALDOC Gene

GeneHancer (GH) Regulatory Elements for ALDOC Gene

Promoters and enhancers for ALDOC Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J028576 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 650.7 +0.1 62 1.6 HDGF FOXA2 PKNOX1 SMAD1 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 ALDOC SUPT6H ENSG00000264577 PHF12 NUFIP2 TMEM199 SDF2 SPAG5-AS1 SGK494 RPL23A
GH17J028575 Promoter 0.7 EPDnew 650.7 +1.7 1669 0.1 CTCF EBF1 ALDOC KIAA0100 ENSG00000265168 ENSG00000258472
GH17J028574 Promoter 0.6 EPDnew 650.7 +2.5 2523 0.1 CTCF ALDOC ENSG00000265168 ENSG00000258472
GH17J028578 Promoter 0.5 EPDnew 650.7 -1.2 -1200 0.1 ALDOC SPAG5 SPAG5-AS1 SGK494 KIAA0100 ENSG00000258472
GH17J028546 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11.7 +26.9 26854 7.7 HDGF PKNOX1 FOXA2 ARID4B SIN3A GLI4 ZNF48 YY1 POLR2B GLIS2 UNC119 PIGS ENSG00000264577 NUFIP2 LOC101927018 PHF12 ENSG00000265205 SDF2 FOXN1 SUPT6H
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ALDOC on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the ALDOC gene promoter:

Genomic Locations for ALDOC Gene

Genomic Locations for ALDOC Gene
chr17:28,573,115-28,577,264
(GRCh38/hg38)
Size:
4,150 bases
Orientation:
Minus strand
chr17:26,900,133-26,904,282
(GRCh37/hg19)

Genomic View for ALDOC Gene

Genes around ALDOC on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ALDOC Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ALDOC Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ALDOC Gene

Proteins for ALDOC Gene

  • Protein details for ALDOC Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P09972-ALDOC_HUMAN
    Recommended name:
    Fructose-bisphosphate aldolase C
    Protein Accession:
    P09972
    Secondary Accessions:
    • B2R5R3
    • Q3SYL3
    • Q6FH94
    • Q6P0L5

    Protein attributes for ALDOC Gene

    Size:
    364 amino acids
    Molecular mass:
    39456 Da
    Quaternary structure:
    • Homotetramer. Interacts with ATP6V1E1. May interact with PLD2.
    Miscellaneous:
    • In vertebrates, three forms of this ubiquitous glycolytic enzyme are found, aldolase A in muscle, aldolase B in liver and aldolase C in brain.
    SequenceCaution:
    • Sequence=AAI03761.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for ALDOC Gene

neXtProt entry for ALDOC Gene

Post-translational modifications for ALDOC Gene

  • Ubiquitination at posLast=330330, posLast=111111, Lys42, and Lys28
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for ALDOC Gene

Domains & Families for ALDOC Gene

Gene Families for ALDOC Gene

Human Protein Atlas (HPA):
  • Cancer-related genes
  • Candidate cardiovascular disease genes
  • Enzymes
  • Plasma proteins
  • Predicted intracellular proteins

Protein Domains for ALDOC Gene

Graphical View of Domain Structure for InterPro Entry

P09972

UniProtKB/Swiss-Prot:

ALDOC_HUMAN :
  • Belongs to the class I fructose-bisphosphate aldolase family.
Family:
  • Belongs to the class I fructose-bisphosphate aldolase family.
genes like me logo Genes that share domains with ALDOC: view

Function for ALDOC Gene

Molecular function for ALDOC Gene

UniProtKB/Swiss-Prot CatalyticActivity:
D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate.
UniProtKB/Swiss-Prot BiophysicochemicalProperties:
Kinetic parameters: KM=10.7 uM for fructose 1,6-bisphosphate {ECO:0000269 PubMed:15537755}; KM=16 mM for fructose 1-phosphate {ECO:0000269 PubMed:15537755};
GENATLAS Biochemistry:
aldolase C,fructose-bisphosphate,160kDa,fructose metabolism,energy pathway,more affinity for F-1-P than for F-1,6-P

Enzyme Numbers (IUBMB) for ALDOC Gene

Gene Ontology (GO) - Molecular Function for ALDOC Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004332 fructose-bisphosphate aldolase activity IEA,IDA 9244396
GO:0005515 protein binding IPI 11399750
GO:0008092 cytoskeletal protein binding IDA 9244396
GO:0016829 lyase activity IEA --
genes like me logo Genes that share ontologies with ALDOC: view
genes like me logo Genes that share phenotypes with ALDOC: view

Animal Models for ALDOC Gene

MGI Knock Outs for ALDOC:
  • Aldoc Aldoc<tm1.1(KOMP)Vlcg>

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ALDOC

Clone Products

No data available for Phenotypes From GWAS Catalog , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for ALDOC Gene

Localization for ALDOC Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ALDOC gene
Compartment Confidence
extracellular 5
cytosol 5
cytoskeleton 4
mitochondrion 3
nucleus 3
lysosome 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytosol (2)
  • Nucleoli fibrillar center (2)
  • Nucleus (2)
  • Vesicles (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for ALDOC Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005739 mitochondrion IEA --
GO:0005829 cytosol TAS --
GO:0005856 cytoskeleton IC 9244396
GO:0034774 secretory granule lumen TAS --
genes like me logo Genes that share ontologies with ALDOC: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for ALDOC Gene

Pathways & Interactions for ALDOC Gene

genes like me logo Genes that share pathways with ALDOC: view

UniProtKB/Swiss-Prot P09972-ALDOC_HUMAN

  • Pathway: Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 4/4.

Gene Ontology (GO) - Biological Process for ALDOC Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006000 fructose metabolic process TAS 3105602
GO:0006094 gluconeogenesis TAS --
GO:0006096 glycolytic process IEA --
GO:0030388 fructose 1,6-bisphosphate metabolic process IDA 9244396
GO:0030855 epithelial cell differentiation IEP 21492153
genes like me logo Genes that share ontologies with ALDOC: view

No data available for SIGNOR curated interactions for ALDOC Gene

Drugs & Compounds for ALDOC Gene

(4) Drugs for ALDOC Gene - From: HMDB

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Zinc Approved, Investigational Pharma 2430
Fosfructose Experimental Pharma 0
Glyceraldehyde-3-Phosphate Experimental Pharma 0
Dihydroxyacetone phosphate Investigational Pharma 0

(5) Additional Compounds for ALDOC Gene - From: HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
beta-D-Fructose 1,6-bisphosphate
  • 1,6-Di-O-phosphono-alpha-D-fructofuranose
  • ALPHA FRUCTOSE 1,6-diphosphATE
  • 1,6-Di-O-phosphono-a-D-fructofuranose
  • 1,6-Di-O-phosphono-α-D-fructofuranose
  • Fructose 1,6-bisphosphoric acid
34693-15-7
D-Erythrose 4-phosphate
  • 4-O-phosphono-D-Erythrose
  • ERYTHOSE-4-phosphATE
  • D-Erythrose 4-phosphoric acid
  • ERYTHOSE-4-phosphoric acid
  • D-Erythrose 4-PO4
585-18-2
fructose 1-phosphate
  • D-Fructose 1-phosphate
  • D-Fructose-1-P
  • D-Fructose-1-phosphate
  • Fructose-1-P
  • Fructose-1-phosphate
15978-08-2
glyceraldehyde
  • (+-)-Glyceraldehyde
  • 2,3-Dihydroxypropanal
  • 2,3-Dihydroxypropionaldehyde
  • Aldotriose
  • alpha,beta-Dihydroxypropionaldehyde
56-82-6
Sedoheptulose 1,7-bisphosphate
  • altro-Heptulose 1,7-biphosphate
  • D-altro-Heptulose 1,7-biphosphate
  • D-Sedoheptulose 1,7-bisphosphate
  • altro-Heptulose 1,7-biphosphoric acid
  • Sedoheptulose 1,7-bisphosphoric acid
genes like me logo Genes that share compounds with ALDOC: view

Transcripts for ALDOC Gene

mRNA/cDNA for ALDOC Gene

Unigene Clusters for ALDOC Gene

Aldolase C, fructose-bisphosphate:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ALDOC

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ALDOC Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b · 3c ^ 4a · 4b ^ 5a · 5b ^ 6a · 6b · 6c ^ 7 ^ 8a · 8b ^ 9a · 9b · 9c · 9d ^ 10 ^ 11
SP1:
SP2: -
SP3:
SP4: - - - -
SP5: - - -
SP6: -

Relevant External Links for ALDOC Gene

GeneLoc Exon Structure for
ALDOC
ECgene alternative splicing isoforms for
ALDOC

Expression for ALDOC Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ALDOC Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ALDOC Gene

This gene is overexpressed in Brain - Cerebellum (x4.9).

Protein differential expression in normal tissues from HIPED for ALDOC Gene

This gene is overexpressed in Retina (15.5), Frontal cortex (11.9), Spinal cord (7.2), and Brain (6.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for ALDOC Gene



Protein tissue co-expression partners for ALDOC Gene

NURSA nuclear receptor signaling pathways regulating expression of ALDOC Gene:

ALDOC

SOURCE GeneReport for Unigene cluster for ALDOC Gene:

Hs.155247

Evidence on tissue expression from TISSUES for ALDOC Gene

  • Nervous system(5)
  • Eye(4.8)
  • Liver(4.6)
  • Intestine(4.3)
  • Heart(3.9)
  • Muscle(2.9)
genes like me logo Genes that share expression patterns with ALDOC: view

No data available for mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ALDOC Gene

Orthologs for ALDOC Gene

This gene was present in the common ancestor of animals.

Orthologs for ALDOC Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ALDOC 34 33
  • 99.54 (n)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ALDOC 34
  • 95 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ALDOC 34 33
  • 93.32 (n)
OneToOne
cow
(Bos Taurus)
Mammalia ALDOC 34 33
  • 92.67 (n)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ALDOC 34
  • 91 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Aldoc 16 34 33
  • 90.54 (n)
rat
(Rattus norvegicus)
Mammalia Aldoc 33
  • 90.45 (n)
chicken
(Gallus gallus)
Aves ALDOC 34 33
  • 81.5 (n)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ALDOC 34
  • 87 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia aldoc 33
  • 77.29 (n)
Str.3134 33
African clawed frog
(Xenopus laevis)
Amphibia aldoc-prov 33
zebrafish
(Danio rerio)
Actinopterygii aldoca 34
  • 79 (a)
OneToOne
aldocb 33
  • 76.49 (n)
-- 33
fruit fly
(Drosophila melanogaster)
Insecta Ald 34 35
  • 67 (a)
ManyToMany
CG5432 34 35
  • 57 (a)
ManyToMany
worm
(Caenorhabditis elegans)
Secernentea T05D4.1 35
  • 65 (a)
F01F1.12b 35
  • 62 (a)
aldo-2 34
  • 61 (a)
ManyToMany
F01F1.12a 35
  • 61 (a)
aldo-1 34 33
  • 60.41 (n)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.11039 34
  • 70 (a)
OneToMany
Cin.5322 33
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.5322 33
Species where no ortholog for ALDOC was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for ALDOC Gene

ENSEMBL:
Gene Tree for ALDOC (if available)
TreeFam:
Gene Tree for ALDOC (if available)
Aminode:
Evolutionary constrained regions (ECRs) for ALDOC: view image

Paralogs for ALDOC Gene

Paralogs for ALDOC Gene

(2) SIMAP similar genes for ALDOC Gene using alignment to 7 proteins:

  • ALDOC_HUMAN
  • A8MVZ9_HUMAN
  • C9J8F3_HUMAN
  • J3KSV6_HUMAN
  • J3QKK1_HUMAN
  • J3QKP5_HUMAN
  • K7EKH5_HUMAN
genes like me logo Genes that share paralogs with ALDOC: view

Variants for ALDOC Gene

Sequence variations from dbSNP and Humsavar for ALDOC Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1001131257 -- 28,576,786(-) C/T intron_variant
rs1001161195 -- 28,576,305(-) G/A intron_variant
rs1001293858 -- 28,577,163(-) AA/AAA upstream_transcript_variant
rs1001310555 -- 28,577,035(-) C/A/T upstream_transcript_variant
rs1001502500 -- 28,576,485(-) G/A/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ALDOC Gene

Variant ID Type Subtype PubMed ID
nsv1064087 CNV gain 25217958

Variation tolerance for ALDOC Gene

Residual Variation Intolerance Score: 33.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.86; 34.84% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ALDOC Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ALDOC

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ALDOC Gene

Disorders for ALDOC Gene

Additional Disease Information for ALDOC

No disorders were found for ALDOC Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ALDOC Gene

Publications for ALDOC Gene

  1. Proteome analysis of schizophrenia patients Wernicke's area reveals an energy metabolism dysregulation. (PMID: 19405953) Martins-de-Souza D … Dias-Neto E (BMC psychiatry 2009) 3 22 58
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
  3. Structure of human brain fructose 1,6-(bis)phosphate aldolase: linking isozyme structure with function. (PMID: 15537755) Arakaki TL … Allen KN (Protein science : a publication of the Protein Society 2004) 3 4 58
  4. Phospholipase D2 directly interacts with aldolase via Its PH domain. (PMID: 11876650) Kim JH … Ryu SH (Biochemistry 2002) 3 4 58
  5. Interaction between aldolase and vacuolar H+-ATPase: evidence for direct coupling of glycolysis to the ATP-hydrolyzing proton pump. (PMID: 11399750) Lu M … Gluck SL (The Journal of biological chemistry 2001) 3 4 58

Products for ALDOC Gene

Sources for ALDOC Gene

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