Aliases for AKT3-IT1 Gene

Subcategory (RNA class) for AKT3-IT1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for AKT3-IT1 Gene

  • AKT3 Intronic Transcript 1 2 3 5
  • AKT3-IT1 2 5 165
  • AKT3 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • NONHSAG004845.2 91
  • HSALNG0012043 164

External Ids for AKT3-IT1 Gene

Previous GeneCards Identifiers for AKT3-IT1 Gene

  • GC00U933370
  • GC01M243957

Summaries for AKT3-IT1 Gene

GeneCards Summary for AKT3-IT1 Gene

AKT3-IT1 (AKT3 Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for AKT3-IT1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AKT3-IT1 Gene

Genomics for AKT3-IT1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AKT3-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J243795 Enhancer 0.3 Ensembl 600.7 -0.9 -900 0.2 ZBTB17 AKT3-IT1 ENSG00000232184 AKT3 CEP170
GH01J243790 Enhancer 0.7 Ensembl ENCODE 0.7 +2.1 2101 3.8 PRDM1 RUNX3 NR3C1 TCF12 NR2F2 GATA3 BATF ZNF121 SDCCAG8 AKT3-IT1 RF00994-110 ENSG00000232184 AKT3 CEP170
GH01J243798 Enhancer 0.6 Ensembl ENCODE 0.4 -5.1 -5100 2.6 PRDM1 SP1 CEBPB FOS FOSL2 ZNF362 ENSG00000236031 AKT3-IT1 ENSG00000232184 AKT3 CEP170
GH01J243803 Enhancer 0.4 Ensembl ENCODE 0.4 -9.4 -9368 1.3 ZNF121 AKT3-IT1 ENSG00000232184 AKT3 CEP170
GH01J243802 Enhancer 0.3 Ensembl 0.4 -8.5 -8500 0.2 ZNF121 AKT3-IT1 ENSG00000232184 AKT3 CEP170
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AKT3-IT1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AKT3-IT1 Gene

Genomic Locations for AKT3-IT1 Gene
chr1:243,793,205-243,794,401
(GRCh38/hg38)
Size:
1,197 bases
Orientation:
Minus strand
chr1:243,956,507-243,957,702
(GRCh37/hg19)
Size:
1,196 bases
Orientation:
Minus strand

Genomic View for AKT3-IT1 Gene

Genes around AKT3-IT1 on UCSC Golden Path with GeneCards custom track
AKT3-IT1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
AKT3-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AKT3-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for AKT3-IT1 Gene

Proteins for AKT3-IT1 Gene

Post-translational modifications for AKT3-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AKT3-IT1 Gene

Domains & Families for AKT3-IT1 Gene

Gene Families for AKT3-IT1 Gene

genes like me logo Genes that share domains with AKT3-IT1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AKT3-IT1 Gene

Function for AKT3-IT1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AKT3-IT1 Gene

Localization for AKT3-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AKT3-IT1 Gene

Pathways & Interactions for AKT3-IT1 Gene

PathCards logo

SuperPathways for AKT3-IT1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AKT3-IT1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AKT3-IT1 Gene

Drugs & Compounds for AKT3-IT1 Gene

No Compound Related Data Available

Transcripts for AKT3-IT1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AKT3-IT1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002C213E_9606 lncRNA 517 5

HGNC: 41304,

Ensembl: ENST00000417120 (view in UCSC) ,

LncBook: HSALNT0025085,

LNCipedia: AKT3-IT1:1,

NONCODE: NONHSAT010627.2,

URS00009B0FC7_9606 lncRNA 517 2

LncBook: HSALNT0025086,

NONCODE: NONHSAT153260.1,

AKT3-IT1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for AKT3-IT1 Gene

1 NCBI additional mRNA sequence :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for AKT3-IT1 Gene

No ASD Table

Relevant External Links for AKT3-IT1 Gene

GeneLoc Exon Structure for
AKT3-IT1

Expression for AKT3-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for AKT3-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for AKT3-IT1 Gene

This gene is overexpressed in Brain - Cerebellum (x5.0) and Brain - Cerebellar Hemisphere (x4.1).
genes like me logo Genes that share expression patterns with AKT3-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AKT3-IT1 Gene

Orthologs for AKT3-IT1 Gene

Evolution for AKT3-IT1 Gene

ENSEMBL:
Gene Tree for AKT3-IT1 (if available)
TreeFam:
Gene Tree for AKT3-IT1 (if available)

No data available for Orthologs for AKT3-IT1 Gene

Paralogs for AKT3-IT1 Gene

No data available for Paralogs for AKT3-IT1 Gene

Variants for AKT3-IT1 Gene

Additional Variant Information for AKT3-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AKT3-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for AKT3-IT1 Gene

Disorders for AKT3-IT1 Gene

Additional Disease Information for AKT3-IT1

No disorders were found for AKT3-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AKT3-IT1 Gene

Publications for AKT3-IT1 Gene

No publications were found for AKT3-IT1 Gene.

Products for AKT3-IT1 Gene

Sources for AKT3-IT1 Gene