Aliases for AKR1C6P Gene

Aliases for AKR1C6P Gene

  • Aldo-Keto Reductase Family 1 Member C6, Pseudogene 2 3 5
  • Truncated Aldo-Keto Reductase 2 3
  • TAKR 2 3
  • Aldo-Keto Reductase, Truncated 3
  • Truncated AKR 3
  • AKR1C6P 5

External Ids for AKR1C6P Gene

Previous GeneCards Identifiers for AKR1C6P Gene

  • GC10M004914

Summaries for AKR1C6P Gene

GeneCards Summary for AKR1C6P Gene

AKR1C6P (Aldo-Keto Reductase Family 1 Member C6, Pseudogene) is a Pseudogene.

Additional gene information for AKR1C6P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AKR1C6P Gene

Genomics for AKR1C6P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AKR1C6P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J004901 Enhancer 0.8 Ensembl ENCODE 0.4 +13.5 13472 2 REST SP1 FOXA2 GATAD2A YY1 JUND NFIC ZNF592 RAD21 HNF4A AKR1C3 AKR1C2 AKR1C1 piR-61101-034 AKR1C6P AKR1E2
GH10J004882 Enhancer 1 Ensembl ENCODE 0.3 +33.0 32953 1.4 LEF1 IKZF1 JUND ZNF24 SP1 BRD9 DPF2 HDAC1 SOX6 EP300 AKR1E2 lnc-AKR1C2-7 piR-31534-037 AKR1C6P AKR1C1
GH10J004931 Enhancer 0.8 Ensembl ENCODE 0.4 -15.5 -15528 0.8 HNRNPL ZSCAN4 SP1 ATF3 YY1 ZBTB33 JUND RAD21 PHF20 HNF4A AKR1C1 piR-39099-031 AKR1C6P AKR1E2
GH10J004924 Enhancer 0.5 FANTOM5 0.4 -8.6 -8625 0.1 ZSCAN4 PAX8 HLTF ZBTB1 KDM1A MTA3 AKR1C2 AKR1C1 UCN3 AKR1C6P piR-39099-031 AKR1E2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AKR1C6P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AKR1C6P Gene

Genomic Locations for AKR1C6P Gene
chr10:4,871,667-4,916,273
(GRCh38/hg38)
Size:
44,607 bases
Orientation:
Minus strand
chr10:4,913,859-4,958,465
(GRCh37/hg19)
Size:
44,607 bases
Orientation:
Minus strand

Genomic View for AKR1C6P Gene

Genes around AKR1C6P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AKR1C6P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AKR1C6P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AKR1C6P Gene

Proteins for AKR1C6P Gene

Post-translational modifications for AKR1C6P Gene

No Post-translational modifications

No data available for DME Specific Peptides for AKR1C6P Gene

Domains & Families for AKR1C6P Gene

Gene Families for AKR1C6P Gene

genes like me logo Genes that share domains with AKR1C6P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AKR1C6P Gene

Function for AKR1C6P Gene

Phenotypes From GWAS Catalog for AKR1C6P Gene

genes like me logo Genes that share phenotypes with AKR1C6P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AKR1C6P Gene

Localization for AKR1C6P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AKR1C6P Gene

Pathways & Interactions for AKR1C6P Gene

PathCards logo

SuperPathways for AKR1C6P Gene

No Data Available

Gene Ontology (GO) - Biological Process for AKR1C6P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AKR1C6P Gene

Drugs & Compounds for AKR1C6P Gene

No Compound Related Data Available

Transcripts for AKR1C6P Gene

mRNA/cDNA for AKR1C6P Gene

4 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for AKR1C6P Gene

No ASD Table

Relevant External Links for AKR1C6P Gene

GeneLoc Exon Structure for
AKR1C6P

Expression for AKR1C6P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for AKR1C6P Gene

mRNA differential expression in normal tissues according to GTEx for AKR1C6P Gene

This gene is overexpressed in Liver (x50.0).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for AKR1C6P

SOURCE GeneReport for Unigene cluster for AKR1C6P Gene:

Hs.631812
genes like me logo Genes that share expression patterns with AKR1C6P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AKR1C6P Gene

Orthologs for AKR1C6P Gene

Evolution for AKR1C6P Gene

ENSEMBL:
Gene Tree for AKR1C6P (if available)
TreeFam:
Gene Tree for AKR1C6P (if available)

No data available for Orthologs for AKR1C6P Gene

Paralogs for AKR1C6P Gene

No data available for Paralogs for AKR1C6P Gene

Variants for AKR1C6P Gene

Structural Variations from Database of Genomic Variants (DGV) for AKR1C6P Gene

Variant ID Type Subtype PubMed ID
esv2762839 CNV loss 21179565
esv3578596 CNV loss 25503493
esv3622212 CNV loss 21293372
nsv1042940 CNV loss 25217958
nsv1045155 CNV loss 25217958
nsv1050246 CNV gain 25217958
nsv519977 CNV gain 19592680
nsv549881 CNV loss 21841781
nsv549882 CNV loss 21841781

Additional Variant Information for AKR1C6P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AKR1C6P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for AKR1C6P Gene

Disorders for AKR1C6P Gene

Additional Disease Information for AKR1C6P

No disorders were found for AKR1C6P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AKR1C6P Gene

Publications for AKR1C6P Gene

  1. Genome wide association study: searching for genes underlying body mass index in the Chinese. (PMID: 24827717) Yang F … Deng HW (Biomedical and environmental sciences : BES 2014) 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  3. Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. (PMID: 16712791) Wang AG … Kim NS (Biochemical and biophysical research communications 2006) 3
  4. Close kinship of human 20alpha-hydroxysteroid dehydrogenase gene with three aldo-keto reductase genes. (PMID: 10672042) Nishizawa M … Ito S (Genes to cells : devoted to molecular & cellular mechanisms 2000) 3

Products for AKR1C6P Gene

Sources for AKR1C6P Gene