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Aliases for AKIRIN1P1 Gene

Subcategory (RNA class) for AKIRIN1P1 Gene

antisense

Aliases for AKIRIN1P1 Gene

  • Akirin 1 Pseudogene 1 2 3 5

External Ids for AKIRIN1P1 Gene

ORGUL Members for AKIRIN1P1 Gene

Summaries for AKIRIN1P1 Gene

GeneCards Summary for AKIRIN1P1 Gene

AKIRIN1P1 (Akirin 1 Pseudogene 1) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for AKIRIN1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AKIRIN1P1 Gene

Genomics for AKIRIN1P1 Gene

GeneHancer (GH) Regulatory Elements for AKIRIN1P1 Gene

Promoters and enhancers for AKIRIN1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I080564 Enhancer 0.5 ENCODE dbSUPER 0.8 -3.8 -3776 1.4 CREB1 AKIRIN1P1 LOC105369867 PTPRQ
GH12I080551 Enhancer 0.9 ENCODE dbSUPER 0.4 +8.8 8849 3.1 JUN BRCA1 HIC1 ZNF366 POLR2A SCRT2 FOSL2 FOS KLF8 TCF7L2 MYF5 AKIRIN1P1 LOC105369867 PTPRQ
GH12I080472 Enhancer 0.9 Ensembl ENCODE 0.2 +88.2 88224 1.4 CTCF FOXA2 ZSCAN4 IRF4 RAD21 ZKSCAN1 CTBP1 GATA3 ZNF143 SMC3 PTPRQ AKIRIN1P1
GH12I080556 Enhancer 0.2 dbSUPER 0.8 +4.7 4682 1.3 MYF5 AKIRIN1P1 LOC105369867 PTPRQ
GH12I080566 Enhancer 0.3 dbSUPER 0.4 -6.2 -6190 2.2 CREB1 AKIRIN1P1 LOC105369867 PTPRQ
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around AKIRIN1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AKIRIN1P1 Gene

Genomic Locations for AKIRIN1P1 Gene
chr12:80,561,013-80,561,560
(GRCh38/hg38)
Size:
548 bases
Orientation:
Minus strand
chr12:80,954,792-80,955,339
(GRCh37/hg19)

Genomic View for AKIRIN1P1 Gene

Genes around AKIRIN1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AKIRIN1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AKIRIN1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AKIRIN1P1 Gene

Proteins for AKIRIN1P1 Gene

Post-translational modifications for AKIRIN1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AKIRIN1P1 Gene

Domains & Families for AKIRIN1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for AKIRIN1P1 Gene

Function for AKIRIN1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AKIRIN1P1 Gene

Localization for AKIRIN1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AKIRIN1P1 Gene

Pathways & Interactions for AKIRIN1P1 Gene

SuperPathways for AKIRIN1P1 Gene

No Data Available

Interacting Proteins for AKIRIN1P1 Gene

Gene Ontology (GO) - Biological Process for AKIRIN1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AKIRIN1P1 Gene

Drugs & Compounds for AKIRIN1P1 Gene

No Compound Related Data Available

Transcripts for AKIRIN1P1 Gene

mRNA/cDNA for AKIRIN1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for AKIRIN1P1 Gene

No ASD Table

Relevant External Links for AKIRIN1P1 Gene

GeneLoc Exon Structure for
AKIRIN1P1
ECgene alternative splicing isoforms for
AKIRIN1P1

Expression for AKIRIN1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for AKIRIN1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of AKIRIN1P1 Gene:

AKIRIN1P1
genes like me logo Genes that share expression patterns with AKIRIN1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AKIRIN1P1 Gene

Orthologs for AKIRIN1P1 Gene

Evolution for AKIRIN1P1 Gene

ENSEMBL:
Gene Tree for AKIRIN1P1 (if available)
TreeFam:
Gene Tree for AKIRIN1P1 (if available)

No data available for Orthologs for AKIRIN1P1 Gene

Paralogs for AKIRIN1P1 Gene

No data available for Paralogs for AKIRIN1P1 Gene

Variants for AKIRIN1P1 Gene

Additional Variant Information for AKIRIN1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AKIRIN1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for AKIRIN1P1 Gene

Disorders for AKIRIN1P1 Gene

No disorders were found for AKIRIN1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AKIRIN1P1 Gene

Publications for AKIRIN1P1 Gene

No publications were found for AKIRIN1P1 Gene.

Products for AKIRIN1P1 Gene

Sources for AKIRIN1P1 Gene

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