Aliases for AJ508598 Gene

Subcategory (RNA class) for AJ508598 Gene

snoRNA

Number of RNA Genes sources:

1 / 17

Aliases for AJ508598 Gene

No Aliases found

No data available for External Ids for AJ508598 Gene

Summaries for AJ508598 Gene

GeneCards Summary for AJ508598 Gene

AJ508598 is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for AJ508598 Gene

Additional gene information for AJ508598 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for AJ508598 Gene

Genomics for AJ508598 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AJ508598 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J031312 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -8.0 -8017 1.2 CTCF FOXA1 REST RAD21 SP1 POLR2A TRIM22 SMARCA5 FOXA2 YY1 SFI1 LIMK2 AJ508598 PIK3IP1 PIK3IP1-DT piR-48428 PATZ1 RF00017-3806
GH22J031306 Enhancer 0.5 Ensembl dbSUPER 0.7 -2.3 -2336 2.6 RUNX3 TCF7 SFI1 RNF185 LIMK2 AJ508598 PIK3IP1 PIK3IP1-DT piR-48428 PATZ1 RF00017-3806
GH22J031329 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -23.8 -23836 2.8 ZIC2 SCRT2 SCRT1 HNF4A SFI1 DRG1 RNU6-1128P SELENOM INPP5J PIK3IP1 piR-48428 PATZ1 AJ508598 PIK3IP1-DT
GH22J031333 Enhancer 0.3 dbSUPER 0.3 -28.7 -28705 1 POLR2A HNF4A piR-48428 SFI1 PATZ1 AJ508598 PIK3IP1 PIK3IP1-DT RF00017-3806
GH22J031332 Enhancer 0.3 Ensembl 0.3 -27.6 -27636 0.8 BHLHE40 piR-48428 RNU6-1128P SFI1 PATZ1 AJ508598 PIK3IP1 PIK3IP1-DT RF00017-3806
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AJ508598 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AJ508598 Gene

Genomic Locations for AJ508598 Gene
chr22:31,305,400-31,305,565
(GRCh38/hg38)
Size:
166 bases
Orientation:
Minus strand

Genomic View for AJ508598 Gene

Genes around AJ508598 on UCSC Golden Path with GeneCards custom track
AJ508598 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AJ508598 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AJ508598 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AJ508598 Gene

Proteins for AJ508598 Gene

Post-translational modifications for AJ508598 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AJ508598 Gene

Domains & Families for AJ508598 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AJ508598 Gene

Function for AJ508598 Gene

Phenotypes From GWAS Catalog for AJ508598 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AJ508598 Gene

Localization for AJ508598 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AJ508598 Gene

Pathways & Interactions for AJ508598 Gene

PathCards logo

SuperPathways for AJ508598 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AJ508598 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AJ508598 Gene

Drugs & Compounds for AJ508598 Gene

No Compound Related Data Available

Transcripts for AJ508598 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AJ508598 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002838D7_9606 snoRNA 166 1

ENA: AJ508598.1:1..166:ncRNA,

AJ508598 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AJ508598 Gene

No ASD Table

Relevant External Links for AJ508598 Gene

GeneLoc Exon Structure for
AJ508598

No data available for mRNA/cDNA for AJ508598 Gene

Expression for AJ508598 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AJ508598 Gene

Orthologs for AJ508598 Gene

No data available for Orthologs and Evolution for AJ508598 Gene

Paralogs for AJ508598 Gene

No data available for Paralogs for AJ508598 Gene

Variants for AJ508598 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AJ508598 Gene

Disorders for AJ508598 Gene

No disorders were found for AJ508598 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AJ508598 Gene

Publications for AJ508598 Gene

No publications were found for AJ508598 Gene.

No data available for Mastermind for AJ508598 Gene

Products for AJ508598 Gene

Sources for AJ508598 Gene