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Aliases for AHCTF1P1 Gene

Aliases for AHCTF1P1 Gene

  • AT-Hook Containing Transcription Factor 1 Pseudogene 1 2 3
  • AT Hook Containing Transcription Factor 1 Pseudogene 2 3
  • ELYS Transcription Factor-Like Protein TMBS62 Pseudogene 3
  • AT Hook Containing Transcription Factor 1 Pseudogene 1 2
  • AC009487.2 5
  • ELYS-Like 3
  • AHCTF1P 3

External Ids for AHCTF1P1 Gene

Previous HGNC Symbols for AHCTF1P1 Gene


Previous GeneCards Identifiers for AHCTF1P1 Gene

  • GC02M162356

Summaries for AHCTF1P1 Gene

GeneCards Summary for AHCTF1P1 Gene

AHCTF1P1 (AT-Hook Containing Transcription Factor 1 Pseudogene 1) is a Pseudogene.

Additional gene information for AHCTF1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AHCTF1P1 Gene

Genomics for AHCTF1P1 Gene

GeneHancer (GH) Regulatory Elements for AHCTF1P1 Gene

Promoters and enhancers for AHCTF1P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J161507 Promoter 0.5 Ensembl 650.7 +0.1 101 0.4 AHCTF1P1 GC02M161505 LINC01806 SLC4A10
GH02J161158 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 18.2 +347.3 347277 3.4 MLX ZFP64 DMAP1 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC SSRP1 LOC105373719 TANK LINC01806 AHCTF1P1 GC02M160996
GH02J162063 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.5 -562.1 -562109 12.4 PKNOX1 FOXA2 ARID4B DMAP1 IRF4 ZNF48 YY1 ZNF143 FOS RUNX3 DPP4 AHCTF1P1 TANK ENSG00000230918 RPEP5
GH02J161237 Enhancer 2.2 VISTA UCNEbase FANTOM5 Ensembl ENCODE 9.9 +269.4 269362 2.7 RB1 ZSCAN4 SIN3A NFXL1 YY1 ZNF335 GLIS2 ZNF366 SCRT2 ZNF143 GC02M161236 GC02M161238 TBR1 LINC01806 AHCTF1P1 SLC4A10 LOC101929512
GH02J162027 Enhancer 1.1 ENCODE dbSUPER 11.1 -520.0 -519952 1 PKNOX1 FOXA2 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 GTF3C2 FOS DPP4 ENSG00000230918 LOC101929512 AHCTF1P1 RPEP5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around AHCTF1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AHCTF1P1 Gene

Genomic Locations for AHCTF1P1 Gene
8,836 bases
Minus strand

Genomic View for AHCTF1P1 Gene

Genes around AHCTF1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AHCTF1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AHCTF1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AHCTF1P1 Gene

Function for AHCTF1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AHCTF1P1 Gene

Localization for AHCTF1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AHCTF1P1 Gene

Pathways & Interactions for AHCTF1P1 Gene

SuperPathways for AHCTF1P1 Gene

No Data Available

Interacting Proteins for AHCTF1P1 Gene

Gene Ontology (GO) - Biological Process for AHCTF1P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for AHCTF1P1 Gene

Drugs & Compounds for AHCTF1P1 Gene

No Compound Related Data Available

Transcripts for AHCTF1P1 Gene

mRNA/cDNA for AHCTF1P1 Gene

(2) Selected AceView cDNA sequences:
(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for AHCTF1P1 Gene

AT hook containing transcription factor 1 pseudogene 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for AHCTF1P1 Gene

No ASD Table

Relevant External Links for AHCTF1P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for AHCTF1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for AHCTF1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of AHCTF1P1 Gene:


SOURCE GeneReport for Unigene cluster for AHCTF1P1 Gene:

genes like me logo Genes that share expression patterns with AHCTF1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AHCTF1P1 Gene

Orthologs for AHCTF1P1 Gene

Evolution for AHCTF1P1 Gene

Gene Tree for AHCTF1P1 (if available)
Gene Tree for AHCTF1P1 (if available)

No data available for Orthologs for AHCTF1P1 Gene

Paralogs for AHCTF1P1 Gene

No data available for Paralogs for AHCTF1P1 Gene

Variants for AHCTF1P1 Gene

Sequence variations from dbSNP and Humsavar for AHCTF1P1 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000054611 -- 161,505,616(-) T/C non_coding_transcript_variant
rs1000308454 -- 161,507,110(-) A/G non_coding_transcript_variant
rs1000332071 -- 161,507,435(-) C/G non_coding_transcript_variant
rs1000486458 -- 161,500,428(-) T/G non_coding_transcript_variant
rs1000848137 -- 161,502,530(-) A/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for AHCTF1P1 Gene

Variant ID Type Subtype PubMed ID
nsv979141 CNV duplication 23825009

Additional Variant Information for AHCTF1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for AHCTF1P1 Gene

Disorders for AHCTF1P1 Gene

Additional Disease Information for AHCTF1P1

No disorders were found for AHCTF1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AHCTF1P1 Gene

Publications for AHCTF1P1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for AHCTF1P1 Gene

Sources for AHCTF1P1 Gene

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