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Aliases for AGAP12P Gene
Aliases for AGAP12P Gene
External Ids for AGAP12P Gene
- HGNC: 23661
- Entrez Gene: 414224
- Ensembl: ENSG00000265018
Previous HGNC Symbols for AGAP12P Gene
- CTGLF12P
Summaries for AGAP12P Gene
GeneCards Summary for AGAP12P Gene
AGAP12P (ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 12, Pseudogene) is a Pseudogene.
Additional gene information for AGAP12P Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AGAP12P Gene
Genomics for AGAP12P Gene
GeneHancer (GH) Regulatory Elements for AGAP12P Gene
Promoters and enhancers for AGAP12P Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around AGAP12P on UCSC Golden Path with GeneCards custom track
Genomic Locations for AGAP12P Gene
Genomic Locations for AGAP12P Gene
- chr10:48,009,873-48,031,640
- (GRCh38/hg38)
- Size:
- 21,768 bases
- Orientation:
- Minus strand
- chr10:49,217,898-49,239,743
- (GRCh37/hg19)
- Size:
- 21,846 bases
- Orientation:
- Minus strand
Genomic View for AGAP12P Gene
Genes around AGAP12P on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 10q11.22 by HGNC
- 10q11.22 by Entrez Gene
- 10q11.22 by Ensembl
AGAP12P Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for AGAP12P Gene
Proteins for AGAP12P Gene
Post-translational modifications for AGAP12P Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for AGAP12P
- Origene Custom Protein Services for AGAP12P
No data available for DME Specific Peptides for AGAP12P Gene
Domains & Families for AGAP12P Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AGAP12P Gene
Function for AGAP12P Gene
Phenotypes for AGAP12P Gene
- GenomeRNAi human phenotypes for AGAP12P:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for AGAP12P
- Applied Biological Materials (abm): CRISPR Clones for AGAP12P - Select products 50% OFF >
- * AGAP12P CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * AGAP12P CRISPR applications: KO, Activation, Repression, and more - Browse All
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for AGAP12P - Select products 50% OFF >
- * AGAP12P as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * AGAP12P tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AGAP12P Gene
Localization for AGAP12P Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AGAP12P Gene
Transcripts for AGAP12P Gene
mRNA/cDNA for AGAP12P Gene
- (2) Additional mRNA sequences :
- (2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000585227 2359 bps (ENST00000585227.6)
- ENST00000603888 2141 bps (ENST00000603888.2)
CRISPR Products
- Browse CRISPR knockouts for AGAP12P
- Applied Biological Materials (abm): CRISPR Clones for AGAP12P - Select products 50% OFF >
- * AGAP12P CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * AGAP12P CRISPR applications: KO, Activation, Repression, and more - Browse All
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for AGAP12P - Select products 50% OFF >
- * AGAP12P as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * AGAP12P tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
Expression for AGAP12P Gene
NURSA nuclear receptor signaling pathways regulating expression of AGAP12P Gene:
AGAP12P
No Expression Related Data Available
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AGAP12P Gene
Orthologs for AGAP12P Gene
No data available for Orthologs for AGAP12P Gene
Paralogs for AGAP12P Gene
No data available for Paralogs for AGAP12P Gene
Variants for AGAP12P Gene
| SNP ID | Clin | Chr 10 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs111242782 | -- | 48,022,059(-) | C/T | intron_variant | |
| rs111383391 | -- | 48,018,931(-) | A/G | intron_variant | |
| rs111580637 | -- | 48,023,561(-) | A/G | intron_variant | |
| rs112037430 | -- | 48,018,877(-) | A/G/T | intron_variant | |
| rs112874775 | -- | 48,011,665(-) | G/C | intron_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv12e203 | CNV | loss | 21179565 |
| esv24863 | CNV | gain+loss | 19812545 |
| esv33214 | CNV | loss | 17666407 |
| nsv1042677 | CNV | loss | 25217958 |
| nsv437672 | CNV | loss | 16327808 |
| nsv469669 | CNV | gain+loss | 16826518 |
| nsv820931 | CNV | deletion | 20802225 |
| nsv831863 | CNV | gain | 17160897 |
| nsv947974 | CNV | duplication | 23825009 |
| nsv975693 | CNV | duplication | 23825009 |
| nsv975696 | CNV | duplication | 23825009 |
| nsv982763 | CNV | duplication | 23825009 |
Additional Variant Information for AGAP12P Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- AGAP12P
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for AGAP12P Gene
Disorders for AGAP12P Gene
Additional Disease Information for AGAP12P
No disorders were found for AGAP12P Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AGAP12P Gene
Publications for AGAP12P Gene
- Transcriptional fates of human-specific segmental duplications in brain. (PMID: 30228200) Dougherty ML … Eichler EE (Genome research 2018) 3 56
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56
No data available for External Links for AGAP12P Gene
Products for AGAP12P Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for AGAP12P
- Origene Custom Protein Services for AGAP12P
- Browse OriGene Inhibitory RNA Products For AGAP12P
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for AGAP12P
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For AGAP12P
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for AGAP12P
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for AGAP12P
- Search GeneCopoeia for miRNA 3'UTR Target clone products for AGAP12P
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for AGAP12P
Sources for AGAP12P Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
- (39) DGV
- (40) dbSNP
- (41) GenAtlas
- (42) HGMD
- (43) GAD
- (44) BGMUT
- (45) HuGE
- (46) Atlas
- (47) GenBank
- (48) H-invDB
- (49) HORDE
- (50) HUGE
- (51) IMGT
- (52) Leiden
- (53) miRBase
- (54) DME
- (55) OriGene
- (56) PubMed
- (57) R&D Systems
- (58) TGDB
- (59) Tocris
- (60) Abcam
- (61) Novus Biologicals
- (62) ProSpec
- (63) Sino Biological
- (64) GenScript
- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
- (111) GTR
- (112) Disease Ontology
- (113) Genetics Home Reference
- (114) MeSH
- (115) MedlinePlus
- (116) CDC
- (117) NINDS
- (118) NCBI Bookshelf
- (119) ClinVar
- (120) Gene Damage Index
- (121) HPO
- (122) UDN
- (123) VISTA
- (124) FANTOM5
- (125) ENCODE
- (126) ProSci
- (127) Horizon
- (128) NURSA
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- (130) VectorBuilder
- (131) SNPedia
- (132) BRCA Exchange
- (133) CIViC
- (134) ProteoGenix
- (135) dbSUPER
- (136) TISSUES
- (137) Gene ORGANizer
- (138) abm
- (139) Human Protein Atlas
- (140) GWAS Catalog
- (141) Monarch Initiative
- (142) DataMed
- (143) HumanCyc
- (144) genomics-online
- (145) UCNEbase
- (146) EPDnew
- (147) Applied Biosystems
- (148) GlyConnect
- (149) Aminode
- (150) GeneCopoeia
- (151) GPS-Prot
- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
- (155) miR2Disease
- (156) DiseaseEnhancer
- (157) Boster Bio
- (158) Biorbyt
- (159) Biocompare
- (160) Mastermind
- (161) CTD^2 Dashboard
- (162) CraniofacialAtlas
- (163) GeneImprint
- (164) Synthego
- (165) Bio Basic
- (166) ENA
- (167) GtRNAdb
- (168) LncBase
- (169) LncBook
- (170) LNCipedia
- (171) LncRNAdb
- (172) Modomics
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- (174) Rfam
- (175) SILVA
- (176) snOPY
- (177) SRPDB
- (178) GENCODE
- (179) TarBase
- (180) MyBioSource