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Aliases for AGAP10P Gene

Aliases for AGAP10P Gene

  • ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 10, Pseudogene 2 3 5
  • Centaurin, Gamma-Like Family, Member 10 Pseudogene 2 3
  • Centaurin, Gamma-Like Family, Member 7 2 3
  • ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 10 Pseudogene 2
  • ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 10 2
  • BA358L16.1 3
  • BA144G6.2 3
  • CTGLF10P 3
  • AGAP10 3
  • CTGLF7 3

External Ids for AGAP10P Gene

Previous HGNC Symbols for AGAP10P Gene

  • AGAP10
  • CTGLF7
  • CTGLF10P

Summaries for AGAP10P Gene

GeneCards Summary for AGAP10P Gene

AGAP10P (ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 10, Pseudogene) is a Pseudogene. Gene Ontology (GO) annotations related to this gene include GTPase activator activity.

Additional gene information for AGAP10P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AGAP10P Gene

Genomics for AGAP10P Gene

GeneHancer (GH) Regulatory Elements for AGAP10P Gene

Promoters and enhancers for AGAP10P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J045680 Enhancer 0.2 Ensembl 600.7 +1.9 1909 0.4 AGAP10P PIR56004 PIR61172
GH10J046522 Enhancer 1.3 Ensembl ENCODE 54.8 +846.3 846279 4.4 ZNF473 MTA3 ZKSCAN8 MLLT1 ZNF121 GTF2F1 CSDE1 ZSCAN21 CDC5L BACH1 PARGP1 AGAP4 BMS1P1 AGAP9 WASHC2C ENSG00000229227 AGAP10P FAM21FP ZFAND4 SHLD2P1
GH10J046265 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 18.5 +589.9 589888 5.6 ZNF473 CDC5L CREM IKZF1 BACH1 IKZF2 ZSCAN4 POLR2A TRIM22 PKNOX1 ANTXRLP1 AGAP10P ZFAND4 AGAP4 ANTXRL ANXA8L1 PIR53286
GH10J045373 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.6 -303.6 -303606 4.6 ZFX ZNF121 ZSCAN21 NCOA6 SP7 KLF14 EGR1 FOSL2 GLIS2 POLR2A ALOX5 OR13A1 AGAP10P WASHC2C ZFAND4 GC10M045391 GC10M045366
GH10J045726 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.5 +48.6 48609 2.6 ZFX CC2D1A SP1 ELF3 MNT CBFA2T2 NKRF MLLT1 ZNF121 GTF2F1 WASHC2C ENSG00000228702 FAM21FP PARGP1 AGAP4 ENSG00000229227 ZFAND4 ENSG00000273363 AGAP10P DEPP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AGAP10P on UCSC Golden Path with GeneCards custom track

Genomic Locations for AGAP10P Gene

Genomic Locations for AGAP10P Gene
chr10:45,678,692-45,700,553
(GRCh38/hg38)
Size:
21,862 bases
Orientation:
Plus strand
chr10:46,174,140-46,195,981
(GRCh37/hg19)
Size:
21,842 bases
Orientation:
Plus strand

Genomic View for AGAP10P Gene

Genes around AGAP10P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AGAP10P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AGAP10P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AGAP10P Gene

Proteins for AGAP10P Gene

Post-translational modifications for AGAP10P Gene

No Post-translational modifications

No data available for DME Specific Peptides for AGAP10P Gene

Domains & Families for AGAP10P Gene

Gene Families for AGAP10P Gene

HGNC:

Suggested Antigen Peptide Sequences for AGAP10P Gene

GenScript: Design optimal peptide antigens:
  • Centaurin-gamma-like family member 7 (AGA10_HUMAN)

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with AGAP10P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for AGAP10P Gene

Function for AGAP10P Gene

Phenotypes From GWAS Catalog for AGAP10P Gene

genes like me logo Genes that share phenotypes with AGAP10P: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AGAP10P Gene

Localization for AGAP10P Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for AGAP10P gene
Compartment Confidence
nucleus 3

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AGAP10P Gene

Pathways & Interactions for AGAP10P Gene

PathCards logo

SuperPathways for AGAP10P Gene

No Data Available

Interacting Proteins for AGAP10P Gene

Gene Ontology (GO) - Biological Process for AGAP10P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AGAP10P Gene

Drugs & Compounds for AGAP10P Gene

No Compound Related Data Available

Transcripts for AGAP10P Gene

mRNA/cDNA for AGAP10P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for AGAP10P Gene

No ASD Table

Relevant External Links for AGAP10P Gene

GeneLoc Exon Structure for
AGAP10P
ECgene alternative splicing isoforms for
AGAP10P

Expression for AGAP10P Gene

NURSA nuclear receptor signaling pathways regulating expression of AGAP10P Gene:

AGAP10P

Evidence on tissue expression from TISSUES for AGAP10P Gene

  • Nervous system(4.2)
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for AGAP10P Gene

Orthologs for AGAP10P Gene

Evolution for AGAP10P Gene

ENSEMBL:
Gene Tree for AGAP10P (if available)
TreeFam:
Gene Tree for AGAP10P (if available)

No data available for Orthologs for AGAP10P Gene

Paralogs for AGAP10P Gene

No data available for Paralogs for AGAP10P Gene

Variants for AGAP10P Gene

Variation tolerance for AGAP10P Gene

Gene Damage Index Score: 0.18; 4.09% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for AGAP10P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AGAP10P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for AGAP10P Gene

Disorders for AGAP10P Gene

No disorders were found for AGAP10P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AGAP10P Gene

Publications for AGAP10P Gene

  1. The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targets. (PMID: 25277244) Katsogiannou M … Rocchi P (Molecular & cellular proteomics : MCP 2014) 3 58
  2. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P … Rogers J (Nature 2004) 3 58

Products for AGAP10P Gene

Sources for AGAP10P Gene

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