AF480515 Gene (RNA Gene)

 

GC05P034055
GIFtS:
3

Aliases for AF480515 Gene

Subcategory (RNA class) for AF480515 Gene

miRNA

Number of RNA Genes sources:

1 / 14

Aliases for AF480515 Gene

No Aliases found

No data available for External Ids for AF480515 Gene

Summaries for AF480515 Gene

GeneCards Summary for AF480515 Gene

AF480515 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AF480515 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AF480515 Gene

Genomics for AF480515 Gene

GeneHancer (GH) Regulatory Elements for AF480515 Gene

Promoters and enhancers for AF480515 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH05J034051 Enhancer 0.6 Ensembl ENCODE 500.7 -1.8 -1800 3.4 GATA3 JUND ZBTB40 SMARCA4 EZH2 AF480515 AMACR lnc-RXFP3-1 C1QTNF3-AMACR
GH05J034059 Enhancer 0.9 Ensembl ENCODE 0.4 +6.4 6360 3.9 SKI FOXA2 NR2F2 ZNF585B CEBPB ZBTB33 JUND FOXP1 SMAD4 BCL6 AMACR AF480515 ENSG00000278900 C1QTNF3-AMACR
GH05J034076 Enhancer 0.5 Ensembl 0.4 +21.9 21859 0.9 CEBPB ZNF843 PRDM6 ZNF366 ZSCAN21 PKNOX1 ZNF629 ZNF561 AMACR AF480515 ENSG00000278900 C1QTNF3-AMACR
GH05J034064 Promoter 0.3 EPDnew 0.4 +9.2 9180 0.1 C1QTNF3 AF480515 ENSG00000278900 C1QTNF3-AMACR
GH05J034082 Enhancer 0.2 Ensembl 0.3 +27.4 27400 0.6 AMACR ENSG00000278900 AF480515 C1QTNF3-AMACR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AF480515 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AF480515 Gene

Genomic Locations for AF480515 Gene
chr5:34,055,101-34,055,116
(GRCh38/hg38)
Size:
16 bases
Orientation:
Plus strand

Genomic View for AF480515 Gene

Genes around AF480515 on UCSC Golden Path with GeneCards custom track

AF480515 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AF480515 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AF480515 Gene

Proteins for AF480515 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for AF480515 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AF480515 Gene

Domains & Families for AF480515 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AF480515 Gene

Function for AF480515 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

miRNA for AF480515 Gene

miRTarBase miRNAs that target AF480515

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for AF480515 Gene

Localization for AF480515 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AF480515 Gene

Pathways & Interactions for AF480515 Gene

PathCards logo

SuperPathways for AF480515 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for AF480515 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AF480515 Gene

Drugs & Compounds for AF480515 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for AF480515 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for AF480515 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for AF480515 Gene

No ASD Table

Relevant External Links for AF480515 Gene

GeneLoc Exon Structure for
AF480515

Expression for AF480515 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AF480515 Gene

Orthologs for AF480515 Gene

No data available for Orthologs and Evolution for AF480515 Gene

Paralogs for AF480515 Gene

No data available for Paralogs for AF480515 Gene

Variants for AF480515 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AF480515 Gene

Disorders for AF480515 Gene

No disorders were found for AF480515 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AF480515 Gene

Publications for AF480515 Gene

No publications were found for AF480515 Gene.

No data available for Mastermind for AF480515 Gene

Products for AF480515 Gene

Sources for AF480515 Gene