AF480502 Gene (RNA Gene)

 

GC17M059841
GIFtS:
4
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Aliases for AF480502 Gene

Subcategory (RNA class) for AF480502 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AF480502 Gene

No Aliases found

No data available for External Ids for AF480502 Gene

Summaries for AF480502 Gene

GeneCards Summary for AF480502 Gene

AF480502 is an RNA Gene, and is affiliated with the miRNA class.

Rfam classification for AF480502 Gene

Additional gene information for AF480502 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for AF480502 Gene

Genomics for AF480502 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for AF480502 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17J059824 Promoter/Enhancer 2.8 VISTA FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -1.5 -1546 36.2 ARHGAP35 SP1 HNRNPL GATAD2A CTCF ATF7 TEAD4 PRDM10 REST ZNF629 AF480502 AB372795 lnc-VMP1-8 TUBD1 PPM1D RPS6KB1 HEATR6 NDUFB8P2 SMG8 DHX40
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AF480502 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AF480502 Gene

Genomic Locations for AF480502 Gene
chr17:59,841,263-59,841,340
(GRCh38/hg38)
Size:
78 bases
Orientation:
Minus strand

Genomic View for AF480502 Gene

Genes around AF480502 on UCSC Golden Path with GeneCards custom track
AF480502 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AF480502 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AF480502 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AF480502 Gene

Proteins for AF480502 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for AF480502 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AF480502 Gene

Domains & Families for AF480502 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AF480502 Gene

Function for AF480502 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for AF480502 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AF480502 Gene

Localization for AF480502 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AF480502 Gene

Pathways & Interactions for AF480502 Gene

PathCards logo

SuperPathways for AF480502 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AF480502 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AF480502 Gene

Drugs & Compounds for AF480502 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for AF480502 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AF480502 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002B3F1C_9606 misc_RNA 78 1

ENA: AF480546.1:1..78:misc_RNA,

URS000028327B_9606 miRNA 22 1

ENA: AF480502.1:1..22:ncRNA,

AF480502 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AF480502 Gene

No ASD Table

Relevant External Links for AF480502 Gene

GeneLoc Exon Structure for
AF480502

No data available for mRNA/cDNA for AF480502 Gene

Expression for AF480502 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AF480502 Gene

Orthologs for AF480502 Gene

No data available for Orthologs and Evolution for AF480502 Gene

Paralogs for AF480502 Gene

No data available for Paralogs for AF480502 Gene

Variants for AF480502 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AF480502 Gene

Disorders for AF480502 Gene

No disorders were found for AF480502 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AF480502 Gene

Publications for AF480502 Gene

No publications were found for AF480502 Gene.

No data available for Mastermind for AF480502 Gene

Products for AF480502 Gene

Sources for AF480502 Gene