Aliases for AF260329 Gene

Subcategory (RNA class) for AF260329 Gene

misc_RNA

Number of RNA Genes sources:

1 / 14

Aliases for AF260329 Gene

No Aliases found

No data available for External Ids for AF260329 Gene

Summaries for AF260329 Gene

GeneCards Summary for AF260329 Gene

AF260329 is an RNA Gene, and is affiliated with the misc_RNA class.

Additional gene information for AF260329 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AF260329 Gene

Genomics for AF260329 Gene

GeneHancer (GH) Regulatory Elements for AF260329 Gene

Promoters and enhancers for AF260329 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J185559 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 500.7 +1.2 1230 1.8 RFX1 KLF9 ZNF316 FOXA2 SAP130 NFE2 ZFHX2 SMAD4 ZNF335 ZGPAT AF260329 PDLIM3 ENSG00000233110
GH04J185565 Enhancer 1.7 VISTA FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.9 -6919 6.9 EP300 POLR2G NCOR1 KDM6A TRIM28 SKI FOXA2 GATA3 TBP SAP130 PDLIM3 UFSP2 AF260329 lnc-SORBS2-1
GH04J185573 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -12.9 -12909 1.9 JUND FOS POLR2A TRIM28 MYC CTBP1 EP300 HDAC2 ZNF341 ZNF316 PDLIM3 lnc-SORBS2-1 AF260329
GH04J185575 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -15.9 -15900 3.2 PBX2 TAL1 TCF12 NFE2 MEIS2 TEAD4 CBFA2T2 PKNOX1 CBFA2T3 YY1 lnc-SORBS2-1 PDLIM3 SORBS2 AF260329
GH04J185555 Enhancer 0.6 ENCODE dbSUPER 0.4 +6.5 6452 0.2 NR2F2 CEBPG SP1 AF260329 PDLIM3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AF260329 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AF260329 Gene

Genomic Locations for AF260329 Gene
chr4:185,560,895-185,561,134
(GRCh38/hg38)
Size:
240 bases
Orientation:
Minus strand

Genomic View for AF260329 Gene

Genes around AF260329 on UCSC Golden Path with GeneCards custom track

AF260329 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AF260329 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AF260329 Gene

Proteins for AF260329 Gene

Post-translational modifications for AF260329 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AF260329 Gene

Domains & Families for AF260329 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AF260329 Gene

Function for AF260329 Gene

miRNA for AF260329 Gene

miRTarBase miRNAs that target AF260329

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for AF260329 Gene

Localization for AF260329 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AF260329 Gene

Pathways & Interactions for AF260329 Gene

PathCards logo

SuperPathways for AF260329 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for AF260329 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AF260329 Gene

Drugs & Compounds for AF260329 Gene

No Compound Related Data Available

Transcripts for AF260329 Gene

mRNA/cDNA for AF260329 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for AF260329 Gene

No ASD Table

Relevant External Links for AF260329 Gene

GeneLoc Exon Structure for
AF260329

Expression for AF260329 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AF260329 Gene

Orthologs for AF260329 Gene

No data available for Orthologs and Evolution for AF260329 Gene

Paralogs for AF260329 Gene

No data available for Paralogs for AF260329 Gene

Variants for AF260329 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AF260329 Gene

Disorders for AF260329 Gene

No disorders were found for AF260329 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AF260329 Gene

Publications for AF260329 Gene

No publications were found for AF260329 Gene.

No data available for Mastermind for AF260329 Gene

Products for AF260329 Gene

Sources for AF260329 Gene