Aliases for ADNP-AS1 Gene

Subcategory (RNA class) for ADNP-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for ADNP-AS1 Gene

  • ADNP Antisense RNA 1 2 3 5
  • ADNP-AS1 2 170
  • NONHSAG032018 94
  • HSALNG0130810 169

External Ids for ADNP-AS1 Gene

Summaries for ADNP-AS1 Gene

GeneCards Summary for ADNP-AS1 Gene

ADNP-AS1 (ADNP Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ADNP-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ADNP-AS1 Gene

Genomics for ADNP-AS1 Gene

GeneHancer (GH) Regulatory Elements for ADNP-AS1 Gene

Promoters and enhancers for ADNP-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ADNP-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ADNP-AS1 Gene

Genomic Locations for ADNP-AS1 Gene
chr20:50,929,642-50,951,278
(GRCh38/hg38)
Size:
21,637 bases
Orientation:
Plus strand
chr20:49,547,521-49,561,671
(GRCh37/hg19)
Size:
14,151 bases
Orientation:
Plus strand

Genomic View for ADNP-AS1 Gene

Genes around ADNP-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADNP-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADNP-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADNP-AS1 Gene

Proteins for ADNP-AS1 Gene

Post-translational modifications for ADNP-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADNP-AS1 Gene

Domains & Families for ADNP-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ADNP-AS1 Gene

Function for ADNP-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADNP-AS1 Gene

Localization for ADNP-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ADNP-AS1 Gene

Pathways & Interactions for ADNP-AS1 Gene

PathCards logo

SuperPathways for ADNP-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ADNP-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ADNP-AS1 Gene

Drugs & Compounds for ADNP-AS1 Gene

No Compound Related Data Available

Transcripts for ADNP-AS1 Gene

mRNA/cDNA for ADNP-AS1 Gene

(3) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(17) RNACentral transcripts :
(5) LncBook transcripts :
(13) LNCipedia transcripts :
(5) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ADNP-AS1 Gene

No ASD Table

Relevant External Links for ADNP-AS1 Gene

GeneLoc Exon Structure for
ADNP-AS1
ECgene alternative splicing isoforms for
ADNP-AS1

Expression for ADNP-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ADNP-AS1 Gene

genes like me logo Genes that share expression patterns with ADNP-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADNP-AS1 Gene

Orthologs for ADNP-AS1 Gene

Evolution for ADNP-AS1 Gene

ENSEMBL:
Gene Tree for ADNP-AS1 (if available)
TreeFam:
Gene Tree for ADNP-AS1 (if available)

No data available for Orthologs for ADNP-AS1 Gene

Paralogs for ADNP-AS1 Gene

No data available for Paralogs for ADNP-AS1 Gene

Variants for ADNP-AS1 Gene

Sequence variations from dbSNP and Humsavar for ADNP-AS1 Gene

SNP ID Clin Chr 20 pos Variation AA Info Type
rs11480415 likely-benign, benign, Congenital disorder of glycosylation, not provided, Congenital disorder of glycosylation type 1E 50,935,243(+) /A/AA/AAA intron_variant
rs146262101 uncertain-significance, Congenital disorder of glycosylation 50,935,136(+) G/A intron_variant
rs1568757730 pathogenic, Congenital disorder of glycosylation type 1E 50,936,198(+) GG/G intron_variant
rs369538517 likely-benign, Congenital disorder of glycosylation type 1E, not specified 50,935,231(+) T/C/G intron_variant
rs373944766 uncertain-significance, Congenital disorder of glycosylation type 1E 50,942,112(+) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ADNP-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1072547 CNV deletion 25765185
nsv1143987 CNV deletion 24896259
nsv834002 CNV loss 17160897
nsv954057 CNV deletion 24416366

Additional Variant Information for ADNP-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADNP-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ADNP-AS1 Gene

Disorders for ADNP-AS1 Gene

Additional Disease Information for ADNP-AS1

No disorders were found for ADNP-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADNP-AS1 Gene

Publications for ADNP-AS1 Gene

No publications were found for ADNP-AS1 Gene.

No data available for External Links for ADNP-AS1 Gene

Products for ADNP-AS1 Gene

Sources for ADNP-AS1 Gene