Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ADIRF-AS1 Gene

Subcategory (RNA class) for ADIRF-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ADIRF-AS1 Gene

  • ADIRF Antisense RNA 1 2 3 5

External Ids for ADIRF-AS1 Gene

Previous GeneCards Identifiers for ADIRF-AS1 Gene

  • GC10M088726

Summaries for ADIRF-AS1 Gene

GeneCards Summary for ADIRF-AS1 Gene

ADIRF-AS1 (ADIRF Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ADIRF-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ADIRF-AS1 Gene

Genomics for ADIRF-AS1 Gene

GeneHancer (GH) Regulatory Elements for ADIRF-AS1 Gene

Promoters and enhancers for ADIRF-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J086965 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 658.8 +1.5 1480 7.8 HDGF CLOCK ARID4B SIN3A DMAP1 BRCA1 YY1 ZNF143 ATF7 FOS ADIRF-AS1 ADIRF AGAP11 ENSG00000273413 MMRN2 SNCG ENSG00000261011 BMS1P3 BMPR1A GRID1
GH10J087090 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 9.8 -122.6 -122585 6.2 MLX ZFP64 DMAP1 YY1 ZNF213 ZNF143 SP3 NFYC SSRP1 ZNF610 SHLD2 GLUD1 NUTM2A-AS1 WAPL RN7SL78P ENSG00000272631 CFL1P1 RPL11P3 ENSG00000223761 RPS26P38
GH10J087860 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 9.7 -893.4 -893426 9 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 PTEN KLLN NUTM2A-AS1 SHLD2 RPL11P3 ADIRF-AS1 LIPJ ENSG00000224745
GH10J086399 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 9.9 +569.9 569908 3.9 HDGF PKNOX1 SMAD1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF213 ENSG00000227896 ENSG00000272631 GRID1 WAPL NUTM2A-AS1 ADIRF-AS1 LDB3 OPN4 GC10M086380 GC10P086443
GH10J086409 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 9.9 +559.2 559150 4.8 HDGF PKNOX1 FOXA2 ARID4B ZNF121 ATF7 RUNX3 SP5 JUNB ZNF592 WAPL NUTM2A-AS1 ENSG00000272631 ADIRF-AS1 GRID1 LDB3 GC10M086380 GC10P086443
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ADIRF-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ADIRF-AS1 Gene

Genomic Locations for ADIRF-AS1 Gene
chr10:86,965,345-86,971,311
(GRCh38/hg38)
Size:
5,967 bases
Orientation:
Minus strand
chr10:88,725,102-88,731,068
(GRCh37/hg19)

Genomic View for ADIRF-AS1 Gene

Genes around ADIRF-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADIRF-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADIRF-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ADIRF-AS1 Gene

Proteins for ADIRF-AS1 Gene

Post-translational modifications for ADIRF-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADIRF-AS1 Gene

Domains & Families for ADIRF-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ADIRF-AS1 Gene

Function for ADIRF-AS1 Gene

Phenotypes From GWAS Catalog for ADIRF-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADIRF-AS1 Gene

Localization for ADIRF-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ADIRF-AS1 Gene

Pathways & Interactions for ADIRF-AS1 Gene

SuperPathways for ADIRF-AS1 Gene

No Data Available

Interacting Proteins for ADIRF-AS1 Gene

Gene Ontology (GO) - Biological Process for ADIRF-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ADIRF-AS1 Gene

Drugs & Compounds for ADIRF-AS1 Gene

No Compound Related Data Available

Transcripts for ADIRF-AS1 Gene

mRNA/cDNA for ADIRF-AS1 Gene

(6) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Unigene Clusters for ADIRF-AS1 Gene

ADIRF antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ADIRF-AS1 Gene

No ASD Table

Relevant External Links for ADIRF-AS1 Gene

GeneLoc Exon Structure for
ADIRF-AS1
ECgene alternative splicing isoforms for
ADIRF-AS1

Expression for ADIRF-AS1 Gene

SOURCE GeneReport for Unigene cluster for ADIRF-AS1 Gene:

Hs.714477
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADIRF-AS1 Gene

Orthologs for ADIRF-AS1 Gene

Evolution for ADIRF-AS1 Gene

ENSEMBL:
Gene Tree for ADIRF-AS1 (if available)
TreeFam:
Gene Tree for ADIRF-AS1 (if available)

No data available for Orthologs for ADIRF-AS1 Gene

Paralogs for ADIRF-AS1 Gene

No data available for Paralogs for ADIRF-AS1 Gene

Variants for ADIRF-AS1 Gene

Additional Variant Information for ADIRF-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADIRF-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ADIRF-AS1 Gene

Disorders for ADIRF-AS1 Gene

Additional Disease Information for ADIRF-AS1

No disorders were found for ADIRF-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADIRF-AS1 Gene

Publications for ADIRF-AS1 Gene

No publications were found for ADIRF-AS1 Gene.

Products for ADIRF-AS1 Gene

Sources for ADIRF-AS1 Gene

Content
Loading form....