Aliases for ADIRF-AS1 Gene

Subcategory (RNA class) for ADIRF-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ADIRF-AS1 Gene

  • ADIRF Antisense RNA 1 2 3 5
  • ADIRF-AS1 2 5 165
  • NONHSAG006424.2 91
  • HSALNG0079425 164

External Ids for ADIRF-AS1 Gene

Previous GeneCards Identifiers for ADIRF-AS1 Gene

  • GC10M088726

Summaries for ADIRF-AS1 Gene

GeneCards Summary for ADIRF-AS1 Gene

ADIRF-AS1 (ADIRF Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ADIRF-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ADIRF-AS1 Gene

Genomics for ADIRF-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ADIRF-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ADIRF-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ADIRF-AS1 Gene

Genomic Locations for ADIRF-AS1 Gene
chr10:86,965,345-86,971,311
(GRCh38/hg38)
Size:
5,967 bases
Orientation:
Minus strand
chr10:88,725,102-88,731,068
(GRCh37/hg19)
Size:
5,967 bases
Orientation:
Minus strand

Genomic View for ADIRF-AS1 Gene

Genes around ADIRF-AS1 on UCSC Golden Path with GeneCards custom track
ADIRF-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ADIRF-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADIRF-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ADIRF-AS1 Gene

Proteins for ADIRF-AS1 Gene

Post-translational modifications for ADIRF-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADIRF-AS1 Gene

Domains & Families for ADIRF-AS1 Gene

Gene Families for ADIRF-AS1 Gene

genes like me logo Genes that share domains with ADIRF-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ADIRF-AS1 Gene

Function for ADIRF-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADIRF-AS1 Gene

Localization for ADIRF-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ADIRF-AS1 Gene

Pathways & Interactions for ADIRF-AS1 Gene

PathCards logo

SuperPathways for ADIRF-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ADIRF-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ADIRF-AS1 Gene

Drugs & Compounds for ADIRF-AS1 Gene

No Compound Related Data Available

Transcripts for ADIRF-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ADIRF-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00008B6552_9606 lncRNA 3822 4

HGNC: 45127,

Ensembl: ENST00000609111 (view in UCSC) ,

LNCipedia: ADIRF-AS1:1,

NONCODE: NONHSAT157290.1,

URS00008BBDCD_9606 lncRNA 502 4

Ensembl: ENST00000440490 (view in UCSC) ,

LncBook: HSALNT0165753,

LNCipedia: ADIRF-AS1:6,

NONCODE: NONHSAT015383.2,

URS00008B582C_9606 lncRNA 2627 2

Ensembl: ENST00000418273 (view in UCSC) ,

LNCipedia: ADIRF-AS1:2,

URS00008B96C0_9606 lncRNA 718 3

LncBook: HSALNT0165754,

LNCipedia: ADIRF-AS1:5,

NONCODE: NONHSAT015384.2,

URS00008B6A56_9606 lncRNA 2205 2

LNCipedia: ADIRF-AS1:7,

NONCODE: NONHSAT157289.1,

ADIRF-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ADIRF-AS1 Gene

3 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ADIRF-AS1 Gene

No ASD Table

Relevant External Links for ADIRF-AS1 Gene

GeneLoc Exon Structure for
ADIRF-AS1

Expression for ADIRF-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ADIRF-AS1

SOURCE GeneReport for Unigene cluster for ADIRF-AS1 Gene:

Hs.714477
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADIRF-AS1 Gene

Orthologs for ADIRF-AS1 Gene

Evolution for ADIRF-AS1 Gene

ENSEMBL:
Gene Tree for ADIRF-AS1 (if available)
TreeFam:
Gene Tree for ADIRF-AS1 (if available)

No data available for Orthologs for ADIRF-AS1 Gene

Paralogs for ADIRF-AS1 Gene

No data available for Paralogs for ADIRF-AS1 Gene

Variants for ADIRF-AS1 Gene

Additional Variant Information for ADIRF-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADIRF-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ADIRF-AS1 Gene

Disorders for ADIRF-AS1 Gene

No disorders were found for ADIRF-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADIRF-AS1 Gene

Publications for ADIRF-AS1 Gene

No publications were found for ADIRF-AS1 Gene.

Products for ADIRF-AS1 Gene

Sources for ADIRF-AS1 Gene