Aliases for ADGRL3-AS1 Gene

Subcategory (RNA class) for ADGRL3-AS1 Gene


Number of RNA Genes sources:

3 / 17

Aliases for ADGRL3-AS1 Gene

  • ADGRL3 Antisense RNA 1 2 3 5
  • ADGRL3-AS1 2 5 165
  • Adhesion G Protein-Coupled Receptor L3 Antisense RNA 1 2 3
  • LPHN3 Antisense RNA 1 2 3
  • NONHSAG038047.2 91
  • HSALNG0034730 164
  • LPHN3-AS1 3

External Ids for ADGRL3-AS1 Gene

Previous HGNC Symbols for ADGRL3-AS1 Gene

  • LPHN3-AS1

Summaries for ADGRL3-AS1 Gene

GeneCards Summary for ADGRL3-AS1 Gene

ADGRL3-AS1 (ADGRL3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ADGRL3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ADGRL3-AS1 Gene

Genomics for ADGRL3-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ADGRL3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J062133 Promoter 0.5 Ensembl 0.3 +31.2 31154 1.6 NR2F2 ATF2 LOC101927145 lnc-ADGRL3-2 ADGRL3-AS1 ADGRL3
GH04J062130 Enhancer 0.2 Ensembl 0.3 +34.7 34654 0.2 lnc-ADGRL3-2 RPS15AP17 ADGRL3-AS1 ADGRL3
GH04J062094 Enhancer 0.2 FANTOM5 0.2 +70.5 70478 0.2 piR-60885-092 RPS15AP17 ADGRL3-AS1 ADGRL3
GH04J062072 Enhancer 0.2 Ensembl 0.2 +93.5 93454 0.2 lnc-ADGRL3-8 ADGRL3-AS1 piR-57394-138 ADGRL3
GH04J062073 Enhancer 0.2 Ensembl 0.2 +91.9 91854 0.6 lnc-ADGRL3-8 ADGRL3-AS1 piR-57394-138 ADGRL3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ADGRL3-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ADGRL3-AS1 Gene

Genomic Locations for ADGRL3-AS1 Gene
93,804 bases
Minus strand
93,803 bases
Minus strand

Genomic View for ADGRL3-AS1 Gene

Genes around ADGRL3-AS1 on UCSC Golden Path with GeneCards custom track
ADGRL3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ADGRL3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADGRL3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADGRL3-AS1 Gene

Proteins for ADGRL3-AS1 Gene

Post-translational modifications for ADGRL3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADGRL3-AS1 Gene

Domains & Families for ADGRL3-AS1 Gene

Gene Families for ADGRL3-AS1 Gene

genes like me logo Genes that share domains with ADGRL3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ADGRL3-AS1 Gene

Function for ADGRL3-AS1 Gene

Phenotypes From GWAS Catalog for ADGRL3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADGRL3-AS1 Gene

Localization for ADGRL3-AS1 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ADGRL3-AS1 gene
Compartment Confidence
golgi apparatus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ADGRL3-AS1 Gene

Pathways & Interactions for ADGRL3-AS1 Gene

PathCards logo

SuperPathways for ADGRL3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ADGRL3-AS1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ADGRL3-AS1 Gene

Drugs & Compounds for ADGRL3-AS1 Gene

No Compound Related Data Available

Transcripts for ADGRL3-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ADGRL3-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000010F5EB_9606 lncRNA 606 4

Ensembl: ENST00000506704 (view in UCSC) ,

LncBook: HSALNT0072859,

LNCipedia: ADGRL3-AS1:1,


URS00000F786F_9606 lncRNA 542 4

Ensembl: ENST00000504135 (view in UCSC) ,

LncBook: HSALNT0072858,

LNCipedia: ADGRL3-AS1:3,


URS000051B7DC_9606 lncRNA 481 4

Ensembl: ENST00000509461 (view in UCSC) ,

LncBook: HSALNT0072860,

LNCipedia: ADGRL3-AS1:2,


URS00004BCD3C_9606 lncRNA 351 4

Ensembl: ENST00000502339 (view in UCSC) ,

LncBook: HSALNT0072863,

LNCipedia: ADGRL3-AS1:5,


URS000075B27D_9606 lncRNA 467 3

HGNC: 50604,

RefSeq: NR_110595,

LNCipedia: ADGRL3-AS1:4,

ADGRL3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ADGRL3-AS1 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for ADGRL3-AS1 Gene

No ASD Table

Relevant External Links for ADGRL3-AS1 Gene

GeneLoc Exon Structure for

Expression for ADGRL3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ADGRL3-AS1 Gene

genes like me logo Genes that share expression patterns with ADGRL3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADGRL3-AS1 Gene

Orthologs for ADGRL3-AS1 Gene

Evolution for ADGRL3-AS1 Gene

Gene Tree for ADGRL3-AS1 (if available)
Gene Tree for ADGRL3-AS1 (if available)

No data available for Orthologs for ADGRL3-AS1 Gene

Paralogs for ADGRL3-AS1 Gene

No data available for Paralogs for ADGRL3-AS1 Gene

Variants for ADGRL3-AS1 Gene

Additional dbSNP identifiers (rs#s) for ADGRL3-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for ADGRL3-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2611251 CNV insertion 19546169
esv3307681 CNV mobile element insertion 20981092
esv3393201 CNV insertion 20981092
esv3407905 CNV insertion 20981092
esv3569451 CNV loss 25503493
esv3600696 CNV loss 21293372
esv3600698 CNV loss 21293372
nsv1005620 CNV loss 25217958
nsv1012574 CNV gain 25217958
nsv1013327 CNV gain 25217958
nsv594332 CNV loss 21841781
nsv594333 CNV gain 21841781
nsv966272 CNV duplication 23825009
nsv997505 CNV gain 25217958

Additional Variant Information for ADGRL3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for ADGRL3-AS1 Gene

Disorders for ADGRL3-AS1 Gene

Additional Disease Information for ADGRL3-AS1

No disorders were found for ADGRL3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADGRL3-AS1 Gene

Publications for ADGRL3-AS1 Gene

No publications were found for ADGRL3-AS1 Gene.

Products for ADGRL3-AS1 Gene

Sources for ADGRL3-AS1 Gene