Aliases for ADGRD1-AS1 Gene
Subcategory (RNA class) for ADGRD1-AS1 Gene
non-coding RNA
Quality Score for this RNA gene is
3
Aliases for ADGRD1-AS1 Gene
External Ids for ADGRD1-AS1 Gene
- HGNC: 53314
- Entrez Gene: 105755954
- Ensembl: ENSG00000256151
Summaries for ADGRD1-AS1 Gene
GeneCards Summary for ADGRD1-AS1 Gene
ADGRD1-AS1 (ADGRD1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.
Additional gene information for ADGRD1-AS1 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ADGRD1-AS1 Gene
Genomics for ADGRD1-AS1 Gene
GeneHancer (GH) Regulatory Elements for ADGRD1-AS1 Gene
Promoters and enhancers for ADGRD1-AS1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH12I130994 | Enhancer | 0.5 | ENCODE | 556.9 | -1.3 | -1294 | 0.9 | SKI SOX13 ARID4B SMAD4 RAD21 | ADGRD1-AS1 PIR57533 ADGRD1 ENSG00000256204 GC12P130991 ENSG00000279128 | |
| GH12I130992 | Enhancer | 0.4 | ENCODE | 558.1 | +1.3 | 1345 | 0.2 | RFX1 EBF1 ZIC2 | ADGRD1-AS1 PIR57533 GC12P130991 ADGRD1 | |
| GH12I130978 | Enhancer | 1.1 | Ensembl ENCODE | 6.8 | +11.8 | 11838 | 6.4 | HDGF PKNOX1 FOXA2 ARID4B FEZF1 ATF7 RUNX3 PPARG MEF2D NFIL3 | ENSG00000279581 ADGRD1 ADGRD1-AS1 ENSG00000256204 GC12P130978 ENSG00000280002 | |
| GH12I131027 | Enhancer | 0.8 | FANTOM5 ENCODE | 6.5 | -34.8 | -34764 | 1.6 | ZNF687 FOXA2 FOSL2 HNF4A FOS CUX1 FOXA1 | ENSG00000279993 ADGRD1 ADGRD1-AS1 ENSG00000256810 GC12P130991 | |
| GH12I130986 | Enhancer | 0.6 | ENCODE | 7.9 | +5.9 | 5852 | 3.6 | DRAP1 SOX5 SOX13 TFAP4 SAP130 FOXA3 NFIL3 HNF1A POLR2A SCRT2 | ENSG00000280002 ADGRD1 ADGRD1-AS1 ENSG00000279581 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around ADGRD1-AS1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for ADGRD1-AS1 Gene
Genomic Locations for ADGRD1-AS1 Gene
- chr12:130,990,138-130,993,976
- (GRCh38/hg38)
- Size:
- 3,839 bases
- Orientation:
- Minus strand
- chr12:131,474,683-131,478,521
- (GRCh37/hg19)
Genomic View for ADGRD1-AS1 Gene
Genes around ADGRD1-AS1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 12q24.33 by Ensembl
- 12q24.33 by Entrez Gene
- 12q24.33 by HGNC
ADGRD1-AS1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ADGRD1-AS1 Gene
Proteins for ADGRD1-AS1 Gene
Post-translational modifications for ADGRD1-AS1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for ADGRD1-AS1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ADGRD1-AS1
- Origene Custom Protein Services for ADGRD1-AS1
- Search GeneTex for Proteins for ADGRD1-AS1
No data available for DME Specific Peptides for ADGRD1-AS1 Gene
Domains & Families for ADGRD1-AS1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ADGRD1-AS1 Gene
Function for ADGRD1-AS1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for ADGRD1-AS1
-
- Search ViGene Biosciences for ADGRD1-AS1
CRISPR Products
- Browse CRISPR knockouts for ADGRD1-AS1
miRNA Products
- Search ViGene Biosciences for ADGRD1-AS1
Inhibitory RNA Products
- Search ViGene Biosciences for ADGRD1-AS1
Clone Products
- GenScript: Custom all cDNA clones Services for ADGRD1-AS1
- VectorBuilder custom plasmid, inducible vectors for ADGRD1-AS1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ADGRD1-AS1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADGRD1-AS1 Gene
Localization for ADGRD1-AS1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ADGRD1-AS1 Gene
Transcripts for ADGRD1-AS1 Gene
mRNA/cDNA for ADGRD1-AS1 Gene
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for ADGRD1-AS1
miRNA Products
- Search ViGene Biosciences for ADGRD1-AS1
Inhibitory RNA Products
- Search ViGene Biosciences for ADGRD1-AS1
Clone Products
- GenScript: Custom all cDNA clones Services for ADGRD1-AS1
- VectorBuilder custom plasmid, inducible vectors for ADGRD1-AS1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ADGRD1-AS1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Relevant External Links for ADGRD1-AS1 Gene
- GeneLoc Exon Structure for
- ADGRD1-AS1
- ECgene alternative splicing isoforms for
- ADGRD1-AS1
Expression for ADGRD1-AS1 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADGRD1-AS1 Gene
Orthologs for ADGRD1-AS1 Gene
Evolution for ADGRD1-AS1 Gene
- ENSEMBL:
- Gene Tree for ADGRD1-AS1 (if available)
- TreeFam:
- Gene Tree for ADGRD1-AS1 (if available)
No data available for Orthologs for ADGRD1-AS1 Gene
Paralogs for ADGRD1-AS1 Gene
No data available for Paralogs for ADGRD1-AS1 Gene
Variants for ADGRD1-AS1 Gene
| SNP ID | Clin | Chr 12 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000039402 | -- | 130,990,328(-) | A/C | downstream_transcript_variant | |
| rs1000178746 | -- | 130,995,833(-) | A/G | upstream_transcript_variant | |
| rs1000280665 | -- | 130,995,491(-) | A/T | upstream_transcript_variant | |
| rs1001085673 | -- | 130,991,418(-) | T/C | intron_variant | |
| rs1001116340 | -- | 130,993,041(-) | T/A | intron_variant |
Additional Variant Information for ADGRD1-AS1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ADGRD1-AS1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ADGRD1-AS1 Gene
Disorders for ADGRD1-AS1 Gene
Additional Disease Information for ADGRD1-AS1
No disorders were found for ADGRD1-AS1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADGRD1-AS1 Gene
Publications for ADGRD1-AS1 Gene
- The landscape of long noncoding RNAs in the human transcriptome. (PMID: 25599403) Iyer MK … Chinnaiyan AM (Nature genetics 2015) 2 3 58
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
Products for ADGRD1-AS1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ADGRD1-AS1
- Origene Custom Protein Services for ADGRD1-AS1
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- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ADGRD1-AS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
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- GenScript: Custom all cDNA clones Services for ADGRD1-AS1
- GenScript Custom Purified and Recombinant Proteins Services for ADGRD1-AS1
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- Browse GenScript CRISPR for ADGRD1-AS1
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- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagent
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- Browse Antibodies at Cloud-Clone Corp.
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- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for ADGRD1-AS1
- VectorBuilder custom plasmid, inducible vectors for ADGRD1-AS1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ADGRD1-AS1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for ADGRD1-AS1
- Search GeneTex for Proteins for ADGRD1-AS1
- Search ViGene Biosciences for ADGRD1-AS1
Sources for ADGRD1-AS1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems