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Aliases for ADGRA1-AS1 Gene

Subcategory (RNA class) for ADGRA1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ADGRA1-AS1 Gene

  • Adhesion G Protein-Coupled Receptor A1 Antisense RNA 1 2 3 5
  • GPR123 Antisense RNA 1 2 3
  • GPR123-AS1 3

External Ids for ADGRA1-AS1 Gene

Previous HGNC Symbols for ADGRA1-AS1 Gene

  • GPR123-AS1

Summaries for ADGRA1-AS1 Gene

GeneCards Summary for ADGRA1-AS1 Gene

ADGRA1-AS1 (Adhesion G Protein-Coupled Receptor A1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ADGRA1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ADGRA1-AS1 Gene

Genomics for ADGRA1-AS1 Gene

GeneHancer (GH) Regulatory Elements for ADGRA1-AS1 Gene

Promoters and enhancers for ADGRA1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I133087 Promoter/Enhancer 1.1 EPDnew ENCODE 550.8 +0.5 539 0.2 MXI1 MAZ RFX1 ZNF189 POLR2A ZNF341 ZBTB26 EZH2 ADGRA1-AS1 ADGRA1
GH10I133101 Enhancer 0.7 ENCODE 0.4 -12.8 -12781 0.2 KLF1 SP3 RFX1 ZNF449 MAX SP2 KLF17 SIN3A BMI1 RFX5 GC10M133102 ADGRA1-AS1 ADGRA1
GH10I133083 Enhancer 0.4 ENCODE 0.4 +5.3 5279 0.2 RFX1 MNT ADGRA1-AS1 ADGRA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ADGRA1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ADGRA1-AS1 Gene

Genomic Locations for ADGRA1-AS1 Gene
chr10:133,083,073-133,088,491
(GRCh38/hg38)
Size:
5,419 bases
Orientation:
Minus strand
chr10:134,898,748-134,900,201
(GRCh37/hg19)

Genomic View for ADGRA1-AS1 Gene

Genes around ADGRA1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADGRA1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADGRA1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADGRA1-AS1 Gene

Proteins for ADGRA1-AS1 Gene

Post-translational modifications for ADGRA1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADGRA1-AS1 Gene

Domains & Families for ADGRA1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ADGRA1-AS1 Gene

Function for ADGRA1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADGRA1-AS1 Gene

Localization for ADGRA1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ADGRA1-AS1 Gene

Pathways & Interactions for ADGRA1-AS1 Gene

SuperPathways for ADGRA1-AS1 Gene

No Data Available

Interacting Proteins for ADGRA1-AS1 Gene

Gene Ontology (GO) - Biological Process for ADGRA1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ADGRA1-AS1 Gene

Drugs & Compounds for ADGRA1-AS1 Gene

No Compound Related Data Available

Transcripts for ADGRA1-AS1 Gene

mRNA/cDNA for ADGRA1-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ADGRA1-AS1 Gene

No ASD Table

Relevant External Links for ADGRA1-AS1 Gene

GeneLoc Exon Structure for
ADGRA1-AS1
ECgene alternative splicing isoforms for
ADGRA1-AS1

Expression for ADGRA1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ADGRA1-AS1 Gene

genes like me logo Genes that share expression patterns with ADGRA1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADGRA1-AS1 Gene

Orthologs for ADGRA1-AS1 Gene

Evolution for ADGRA1-AS1 Gene

ENSEMBL:
Gene Tree for ADGRA1-AS1 (if available)
TreeFam:
Gene Tree for ADGRA1-AS1 (if available)

No data available for Orthologs for ADGRA1-AS1 Gene

Paralogs for ADGRA1-AS1 Gene

No data available for Paralogs for ADGRA1-AS1 Gene

Variants for ADGRA1-AS1 Gene

Sequence variations from dbSNP and Humsavar for ADGRA1-AS1 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000579786 -- 133,087,796(-) C/T upstream_transcript_variant
rs1001667413 -- 133,085,123(-) A/C downstream_transcript_variant
rs1001701506 -- 133,087,415(-) G/A/C upstream_transcript_variant
rs1001755613 -- 133,087,732(-) T/C upstream_transcript_variant
rs1002639617 -- 133,088,343(-) G/A upstream_transcript_variant

Additional Variant Information for ADGRA1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADGRA1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ADGRA1-AS1 Gene

Disorders for ADGRA1-AS1 Gene

Additional Disease Information for ADGRA1-AS1

No disorders were found for ADGRA1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADGRA1-AS1 Gene

Publications for ADGRA1-AS1 Gene

No publications were found for ADGRA1-AS1 Gene.

Products for ADGRA1-AS1 Gene

Sources for ADGRA1-AS1 Gene

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