Aliases for ADCY6-DT Gene

Subcategory (RNA class) for ADCY6-DT Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ADCY6-DT Gene

  • ADCY6 Divergent Transcript 2 3 5
  • HSALNG0090878 167
  • NONHSAG011059 92
  • Lnc-CACNB3-1 168
  • ADCY6-DT 2

External Ids for ADCY6-DT Gene

Summaries for ADCY6-DT Gene

GeneCards Summary for ADCY6-DT Gene

ADCY6-DT (ADCY6 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ADCY6-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ADCY6-DT Gene

Genomics for ADCY6-DT Gene

GeneHancer (GH) Regulatory Elements for ADCY6-DT Gene

Promoters and enhancers for ADCY6-DT Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J048786 Promoter/Enhancer 1.9 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.6 -605 4.3 POLR2G PHF8 ZNF10 ZIC2 REST ZBTB10 CLOCK ZNF423 ZBTB26 ZBTB7A ADCY6 ADCY6-DT lnc-DDX23-2 LOC390314 DDX23 KMT2D CCNT1 HDAC7 KANSL2 CACNB3
GH12J048794 Enhancer 0.8 ENCODE 0.4 +6.2 6198 2.2 ZNF217 CTCF NCOR1 ZNF10 REST CUX1 RAD21 MYC TRIM22 TEAD1 KANSL2 CCNT1 SENP1 LOC390314 ENSG00000257964 DDX23 KMT2D PRPF40B ADCY6-DT MG828730-015
GH12J048798 Enhancer 0.2 Ensembl 0.4 +9.8 9754 0.2 LOC390314 ADCY6-DT lnc-ADCY6-1 MG828730-015
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ADCY6-DT on UCSC Golden Path with GeneCards custom track

Genomic Locations for ADCY6-DT Gene

Genomic Locations for ADCY6-DT Gene
chr12:48,789,147-48,790,567
(GRCh38/hg38)
Size:
1,421 bases
Orientation:
Plus strand
chr12:49,182,930-49,184,332
(GRCh37/hg19)
Size:
1,403 bases
Orientation:
Plus strand

Genomic View for ADCY6-DT Gene

Genes around ADCY6-DT on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADCY6-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADCY6-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADCY6-DT Gene

Proteins for ADCY6-DT Gene

Post-translational modifications for ADCY6-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADCY6-DT Gene

Domains & Families for ADCY6-DT Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ADCY6-DT Gene

Function for ADCY6-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADCY6-DT Gene

Localization for ADCY6-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ADCY6-DT Gene

Pathways & Interactions for ADCY6-DT Gene

PathCards logo

SuperPathways for ADCY6-DT Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ADCY6-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ADCY6-DT Gene

Drugs & Compounds for ADCY6-DT Gene

No Compound Related Data Available

Transcripts for ADCY6-DT Gene

mRNA/cDNA for ADCY6-DT Gene

7 RNACentral transcripts :
2 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 NONCODE transcripts :
3 LncBook transcripts :
4 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ADCY6-DT Gene

No ASD Table

Relevant External Links for ADCY6-DT Gene

GeneLoc Exon Structure for
ADCY6-DT

Expression for ADCY6-DT Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ADCY6-DT

SOURCE GeneReport for Unigene cluster for ADCY6-DT Gene:

Hs.306727
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADCY6-DT Gene

Orthologs for ADCY6-DT Gene

Evolution for ADCY6-DT Gene

ENSEMBL:
Gene Tree for ADCY6-DT (if available)
TreeFam:
Gene Tree for ADCY6-DT (if available)

No data available for Orthologs for ADCY6-DT Gene

Paralogs for ADCY6-DT Gene

No data available for Paralogs for ADCY6-DT Gene

Variants for ADCY6-DT Gene

Additional dbSNP identifiers (rs#s) for ADCY6-DT Gene

Structural Variations from Database of Genomic Variants (DGV) for ADCY6-DT Gene

Variant ID Type Subtype PubMed ID
nsv1069662 CNV deletion 25765185
nsv826363 CNV gain 20364138

Additional Variant Information for ADCY6-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADCY6-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for ADCY6-DT Gene

Disorders for ADCY6-DT Gene

No disorders were found for ADCY6-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ADCY6-DT Gene

Publications for ADCY6-DT Gene

No publications were found for ADCY6-DT Gene.

No data available for Mastermind for ADCY6-DT Gene

Products for ADCY6-DT Gene

Sources for ADCY6-DT Gene