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Aliases for ADAP1 Gene

Aliases for ADAP1 Gene

  • ArfGAP With Dual PH Domains 1 2 3 5
  • Putative MAPK-Activating Protein PM25 3 4
  • Centaurin-Alpha-1 3 4
  • Cnt-A1 3 4
  • CENTA1 3 4
  • Arf-GAP With Dual PH Domain-Containing Protein 1 3
  • Centaurin, Alpha 1 2
  • Centaurin-Alpha 3
  • P42IP4 3
  • GCS1L 3

External Ids for ADAP1 Gene

Previous HGNC Symbols for ADAP1 Gene

  • CENTA1

Previous GeneCards Identifiers for ADAP1 Gene

  • GC07M000905
  • GC07M000938

Summaries for ADAP1 Gene

GeneCards Summary for ADAP1 Gene

ADAP1 (ArfGAP With Dual PH Domains 1) is a Protein Coding gene. Among its related pathways are Arf6 signaling events and B Cell Receptor Signaling Pathway (sino). Gene Ontology (GO) annotations related to this gene include GTPase activator activity and inositol 1,3,4,5 tetrakisphosphate binding. An important paralog of this gene is ADAP2.

UniProtKB/Swiss-Prot for ADAP1 Gene

  • GTPase-activating protein for the ADP ribosylation factor family (Probable). Binds phosphatidylinositol 3,4,5-trisphosphate (PtdInsP3) and inositol 1,3,4,5-tetrakisphosphate (InsP4).

Gene Wiki entry for ADAP1 Gene

Additional gene information for ADAP1 Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ADAP1 Gene

Genomics for ADAP1 Gene

GeneHancer (GH) Regulatory Elements for ADAP1 Gene

Promoters and enhancers for ADAP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I000921 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 570.8 +28.7 28650 10.5 HDGF SMAD1 MLX ARID4B DMAP1 ZBTB7B IRF4 ZNF48 TCF12 ZNF207 ADAP1 LOC105375120 CYP2W1 ZFAND2A LOC101927021 C7orf50 COX19 PIR34198 GC07P000891
GH07I000952 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 557.9 +1.9 1863 2.5 RB1 ZFP64 ARID4B SIN3A DMAP1 RAD21 ZNF48 GLIS2 ELK1 ZNF143 ADAP1 PIR34198 COX19
GH07I000944 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 561.2 +9.1 9071 3.5 ESRRA SIN3A ZBTB7B ZNF48 MTA3 CTBP1 ELK1 POLR2A NR2F6 FOSL2 ADAP1 LOC105375120 ZFAND2A CYP2W1 PIR34198 COX19
GH07I000920 Promoter/Enhancer 0.9 EPDnew dbSUPER 550.3 +34.5 34511 0.1 ZFHX2 EGR2 ADAP1 PIR34198 GC07P000891 COX19
GH07I000971 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12.7 -20.8 -20837 8.8 HDGF PKNOX1 CLOCK FOXA2 SMAD1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 COX19 CYP2W1 LOC105375120 GPR146 DNAAF5 MIR339 ADAP1 ENSG00000225146 C7orf50 SUN1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ADAP1 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the ADAP1 gene promoter:

Genomic Locations for ADAP1 Gene

Genomic Locations for ADAP1 Gene
chr7:897,900-955,407
(GRCh38/hg38)
Size:
57,508 bases
Orientation:
Minus strand
chr7:937,537-995,043
(GRCh37/hg19)

Genomic View for ADAP1 Gene

Genes around ADAP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADAP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADAP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADAP1 Gene

Proteins for ADAP1 Gene

  • Protein details for ADAP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O75689-ADAP1_HUMAN
    Recommended name:
    Arf-GAP with dual PH domain-containing protein 1
    Protein Accession:
    O75689
    Secondary Accessions:
    • A4D2Q2
    • B3KRZ4
    • B4DVA6
    • F6XZ68
    • H7C2Q4

    Protein attributes for ADAP1 Gene

    Size:
    374 amino acids
    Molecular mass:
    43395 Da
    Quaternary structure:
    • Interacts with PRKCA, PRKCI and PRKCZ. Interacts with the N-terminal region of PRKD1.

    Three dimensional structures from OCA and Proteopedia for ADAP1 Gene

    Alternative splice isoforms for ADAP1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ADAP1 Gene

Post-translational modifications for ADAP1 Gene

No data available for DME Specific Peptides for ADAP1 Gene

Domains & Families for ADAP1 Gene

Gene Families for ADAP1 Gene

Suggested Antigen Peptide Sequences for ADAP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ADAP1: view

No data available for UniProtKB/Swiss-Prot for ADAP1 Gene

Function for ADAP1 Gene

Molecular function for ADAP1 Gene

UniProtKB/Swiss-Prot Function:
GTPase-activating protein for the ADP ribosylation factor family (Probable). Binds phosphatidylinositol 3,4,5-trisphosphate (PtdInsP3) and inositol 1,3,4,5-tetrakisphosphate (InsP4).

Phenotypes From GWAS Catalog for ADAP1 Gene

Gene Ontology (GO) - Molecular Function for ADAP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005096 GTPase activator activity IDA 10333475
GO:0005515 protein binding IPI 12893243
GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEA --
GO:0043533 inositol 1,3,4,5 tetrakisphosphate binding TAS 12018390
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ADAP1: view
genes like me logo Genes that share phenotypes with ADAP1: view

Clone Products

  • Addgene plasmids for ADAP1

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ADAP1 Gene

Localization for ADAP1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ADAP1 Gene

Nucleus. Cytoplasm. Note=Recruited to the plasma membrane upon epidermal growth factor-dependent activation of phosphatidylinositol 4,5-diphosphate (PtdInsP2) 3-kinase.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ADAP1 gene
Compartment Confidence
plasma membrane 5
nucleus 5
cytosol 5
cytoskeleton 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytosol (3)
  • Plasma membrane (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for ADAP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA,IEA 10333475
GO:0005737 cytoplasm IDA,IEA 10333475
GO:0005829 cytosol IDA --
GO:0005886 plasma membrane IDA 10333475
genes like me logo Genes that share ontologies with ADAP1: view

Pathways & Interactions for ADAP1 Gene

genes like me logo Genes that share pathways with ADAP1: view

Pathways by source for ADAP1 Gene

1 Sino Biological pathway for ADAP1 Gene
2 BioSystems pathways for ADAP1 Gene

Gene Ontology (GO) - Biological Process for ADAP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007166 cell surface receptor signaling pathway TAS 10333475
GO:0043087 regulation of GTPase activity IMP 10333475
GO:0043547 positive regulation of GTPase activity IEA --
genes like me logo Genes that share ontologies with ADAP1: view

No data available for SIGNOR curated interactions for ADAP1 Gene

Drugs & Compounds for ADAP1 Gene

(1) Drugs for ADAP1 Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials

(3) Additional Compounds for ADAP1 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with ADAP1: view

Transcripts for ADAP1 Gene

Unigene Clusters for ADAP1 Gene

ArfGAP with dual PH domains 1:
Representative Sequences:

Clone Products

  • Addgene plasmids for ADAP1

Alternative Splicing Database (ASD) splice patterns (SP) for ADAP1 Gene

ExUns: 1 ^ 2 ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^ 12a · 12b
SP1: - - -
SP2: - -
SP3:
SP4:
SP5: -

Relevant External Links for ADAP1 Gene

GeneLoc Exon Structure for
ADAP1
ECgene alternative splicing isoforms for
ADAP1

Expression for ADAP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ADAP1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ADAP1 Gene

This gene is overexpressed in Whole Blood (x4.9).

Protein differential expression in normal tissues from HIPED for ADAP1 Gene

This gene is overexpressed in Fetal Brain (15.1), Frontal cortex (12.8), Spinal cord (11.8), and Stomach (8.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for ADAP1 Gene



NURSA nuclear receptor signaling pathways regulating expression of ADAP1 Gene:

ADAP1

SOURCE GeneReport for Unigene cluster for ADAP1 Gene:

Hs.602573

mRNA Expression by UniProt/SwissProt for ADAP1 Gene:

O75689-ADAP1_HUMAN
Tissue specificity: Expressed at highest levels in brain and at lower levels in peripheral blood leukocytes.

Evidence on tissue expression from TISSUES for ADAP1 Gene

  • Intestine(4)
  • Lung(4)
genes like me logo Genes that share expression patterns with ADAP1: view

No data available for Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADAP1 Gene

Orthologs for ADAP1 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ADAP1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ADAP1 33
  • 99.64 (n)
oppossum
(Monodelphis domestica)
Mammalia ADAP1 34
  • 90 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ADAP1 33 34
  • 89.66 (n)
mouse
(Mus musculus)
Mammalia Adap1 33 16 34
  • 88.59 (n)
cow
(Bos Taurus)
Mammalia ADAP1 33 34
  • 88.2 (n)
rat
(Rattus norvegicus)
Mammalia Adap1 33
  • 87.7 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia ADAP1 34
  • 76 (a)
OneToOne
chicken
(Gallus gallus)
Aves ADAP1 33 34
  • 78.7 (n)
lizard
(Anolis carolinensis)
Reptilia ADAP1 34
  • 85 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100037843 33
  • 71.57 (n)
MGC76109 33
African clawed frog
(Xenopus laevis)
Amphibia MGC69045 33
zebrafish
(Danio rerio)
Actinopterygii CABZ01073174.1 34
  • 78 (a)
OneToOne
zgc:92360 33
  • 66.49 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP007379 33
  • 54.83 (n)
fruit fly
(Drosophila melanogaster)
Insecta CG8243 34
  • 14 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea W09D10.1 34
  • 16 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes AGE2 34
  • 19 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.8094 34
  • 41 (a)
OneToMany
Species where no ortholog for ADAP1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for ADAP1 Gene

ENSEMBL:
Gene Tree for ADAP1 (if available)
TreeFam:
Gene Tree for ADAP1 (if available)

Paralogs for ADAP1 Gene

Paralogs for ADAP1 Gene

genes like me logo Genes that share paralogs with ADAP1: view

Variants for ADAP1 Gene

Sequence variations from dbSNP and Humsavar for ADAP1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000026463 -- 943,989(-) C/A genic_upstream_transcript_variant, intron_variant
rs1000029894 -- 949,277(-) GGCCACACGGCCAC/GGCCAC genic_upstream_transcript_variant, intron_variant
rs1000047401 -- 916,585(-) G/A intron_variant
rs1000057515 -- 944,757(-) C/T genic_upstream_transcript_variant, intron_variant
rs1000078359 -- 931,928(-) G/A genic_upstream_transcript_variant, intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ADAP1 Gene

Variant ID Type Subtype PubMed ID
dgv11111n54 CNV loss 21841781
dgv11112n54 CNV loss 21841781
dgv11113n54 CNV gain 21841781
dgv11114n54 CNV gain 21841781
dgv11115n54 CNV loss 21841781
dgv3732e59 CNV duplication 20981092
dgv3733e59 CNV duplication 20981092
esv1008204 CNV deletion 20482838
esv1065077 CNV insertion 17803354
esv1134099 CNV deletion 17803354
esv1175595 CNV deletion 17803354
esv1298219 CNV deletion 17803354
esv1449576 CNV insertion 17803354
esv1457769 CNV deletion 17803354
esv1612925 CNV deletion 17803354
esv1647726 CNV deletion 17803354
esv1650528 CNV deletion 17803354
esv1704339 CNV deletion 17803354
esv22202 CNV gain 19812545
esv22922 CNV loss 19812545
esv2615886 CNV insertion 19546169
esv2733676 CNV deletion 23290073
esv2733677 CNV deletion 23290073
esv2733678 CNV deletion 23290073
esv2733679 CNV deletion 23290073
esv2733680 CNV deletion 23290073
esv2733681 CNV deletion 23290073
esv2733682 CNV deletion 23290073
esv2733684 CNV deletion 23290073
esv2733685 CNV deletion 23290073
esv2733686 CNV deletion 23290073
esv2733687 CNV deletion 23290073
esv2733688 CNV deletion 23290073
esv2733689 CNV deletion 23290073
esv2733690 CNV deletion 23290073
esv2733691 CNV deletion 23290073
esv2733692 CNV deletion 23290073
esv29574 CNV gain 19812545
esv3420 CNV loss 18987735
esv3571557 CNV loss 25503493
esv3571558 CNV loss 25503493
esv3611796 CNV gain 21293372
esv3891008 CNV loss 25118596
esv6292 CNV loss 19470904
esv997493 CNV deletion 20482838
nsv1073623 CNV deletion 25765185
nsv1073624 CNV deletion 25765185
nsv1073625 CNV deletion 25765185
nsv1073626 CNV deletion 25765185
nsv1078839 CNV insertion 25765185
nsv1114904 CNV deletion 24896259
nsv1114905 CNV deletion 24896259
nsv1117688 CNV deletion 24896259
nsv1124156 CNV deletion 24896259
nsv1125904 CNV tandem duplication 24896259
nsv1126089 CNV deletion 24896259
nsv1133395 CNV tandem duplication 24896259
nsv1133643 CNV deletion 24896259
nsv1137183 CNV deletion 24896259
nsv1140200 CNV insertion 24896259
nsv1143179 CNV tandem duplication 24896259
nsv1145118 CNV deletion 24896259
nsv1146694 CNV deletion 26484159
nsv1152364 CNV insertion 26484159
nsv1161477 CNV deletion 26073780
nsv366410 CNV deletion 16902084
nsv366941 CNV insertion 16902084
nsv464244 CNV loss 19166990
nsv464245 CNV gain 19166990
nsv475830 CNV novel sequence insertion 20440878
nsv509182 CNV insertion 20534489
nsv511937 CNV loss 21212237
nsv512903 CNV insertion 21212237
nsv512904 CNV insertion 21212237
nsv5611 CNV insertion 18451855
nsv605699 CNV loss 21841781
nsv605700 CNV gain 21841781
nsv605702 CNV loss 21841781
nsv605703 CNV loss 21841781
nsv605704 CNV gain 21841781
nsv605705 CNV loss 21841781
nsv605706 CNV loss 21841781
nsv605714 CNV gain+loss 21841781
nsv950784 CNV deletion 24416366

Variation tolerance for ADAP1 Gene

Residual Variation Intolerance Score: 18.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.35; 26.66% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ADAP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADAP1

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ADAP1 Gene

Disorders for ADAP1 Gene

Additional Disease Information for ADAP1

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for ADAP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADAP1 Gene

Publications for ADAP1 Gene

  1. Identification of centaurin-alpha1 as a potential in vivo phosphatidylinositol 3,4,5-trisphosphate-binding protein that is functionally homologous to the yeast ADP-ribosylation factor (ARF) GTPase-activating protein, Gcs1. (PMID: 10333475) Venkateswarlu K … Cullen PJ (The Biochemical journal 1999) 2 3 4 22 58
  2. Molecular cloning and functional characterization of a human homologue of centaurin-alpha. (PMID: 10448098) Venkateswarlu K … Cullen PJ (Biochemical and biophysical research communications 1999) 3 4 22 58
  3. Risk of meningioma and common variation in genes related to innate immunity. (PMID: 20406964) Rajaraman P … Inskip PD (Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2010) 3 44 58
  4. Polymorphisms in innate immunity genes and risk of childhood leukemia. (PMID: 20438785) Han S … Kang D (Human immunology 2010) 3 44 58
  5. Centaurin-alpha 1, an ADP-ribosylation factor 6 GTPase activating protein, inhibits beta 2-adrenoceptor internalization. (PMID: 15778454) Lawrence J … Venkateswarlu K (Molecular pharmacology 2005) 3 22 58

Products for ADAP1 Gene

  • Addgene plasmids for ADAP1

Sources for ADAP1 Gene

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