Aliases for ADAM20P1 Gene

Aliases for ADAM20P1 Gene

  • ADAM Metallopeptidase Domain 20 Pseudogene 1 2 3 5
  • Metalloproteinase-Disintegrin 1-2 Pseudogene 3
  • Chromosome 14 Open Reading Frame 55 2
  • CTD-2540L5.4 3
  • C14orf55 3

External Ids for ADAM20P1 Gene

Previous HGNC Symbols for ADAM20P1 Gene

  • C14orf55

Previous GeneCards Identifiers for ADAM20P1 Gene

  • GC14M070937

Summaries for ADAM20P1 Gene

GeneCards Summary for ADAM20P1 Gene

ADAM20P1 (ADAM Metallopeptidase Domain 20 Pseudogene 1) is a Pseudogene.

Additional gene information for ADAM20P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ADAM20P1 Gene

Genomics for ADAM20P1 Gene

GeneHancer (GH) Regulatory Elements for ADAM20P1 Gene

Promoters and enhancers for ADAM20P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J070358 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 5.2 +124.6 124575 2.8 ZNF785 SIN3A ZNF24 SP1 ZBTB40 SIX5 ZBTB6 LCORL MLX RBPJ COX16 RF00004-043 RNU2-51P SRSF5 RPL7AP6 MED6 PTTG4P SUSD6 ERH ADAM20
GH14J070317 Enhancer 0.9 ENCODE 5.4 +165.5 165549 1.7 CTCF FOXA1 MLX RBPJ NR2F6 ATF1 CREB1 MIXL1 HLF RAD21 COX16 RNU2-51P SLC8A3 ADAM20P1 ADAM21 piR-48950-059 piR-59065 ENSG00000259033
GH14J070567 Enhancer 0.7 Ensembl ENCODE 5.4 -85.0 -85037 2 CTCF RAD21 MAFK POLR2A SMC3 ZNF143 SIN3A BACH1 piR-34609 MED6 COX16 RNU2-51P ADAM20P1 TTC9 HSALNG0102224
GH14J070278 Enhancer 0.3 Ensembl 5.4 +203.3 203274 4.6 ZSCAN21 RFX5 COX16 ADAM21P1 RNU2-51P ADAM21 ADAM20P1 SLC8A3 SYNJ2BP piR-35011-004 piR-36588-158 ENSG00000259033
GH14J070462 Enhancer 0.2 Ensembl 5.5 +21.5 21474 0.2 ADAM20 ADAM20P1 ADAM21 piR-47086-116 ENSG00000257759
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ADAM20P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ADAM20P1 Gene

Genomic Locations for ADAM20P1 Gene
chr14:70,453,541-70,483,775
(GRCh38/hg38)
Size:
30,235 bases
Orientation:
Minus strand
chr14:70,935,593-70,950,473
(GRCh37/hg19)
Size:
14,881 bases
Orientation:
Minus strand

Genomic View for ADAM20P1 Gene

Genes around ADAM20P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADAM20P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADAM20P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADAM20P1 Gene

Proteins for ADAM20P1 Gene

Post-translational modifications for ADAM20P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADAM20P1 Gene

Domains & Families for ADAM20P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ADAM20P1 Gene

Function for ADAM20P1 Gene

Phenotypes From GWAS Catalog for ADAM20P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADAM20P1 Gene

Localization for ADAM20P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ADAM20P1 Gene

Pathways & Interactions for ADAM20P1 Gene

PathCards logo

SuperPathways for ADAM20P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ADAM20P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ADAM20P1 Gene

Drugs & Compounds for ADAM20P1 Gene

No Compound Related Data Available

Transcripts for ADAM20P1 Gene

mRNA/cDNA for ADAM20P1 Gene

(1) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ADAM20P1 Gene

No ASD Table

Relevant External Links for ADAM20P1 Gene

GeneLoc Exon Structure for
ADAM20P1
ECgene alternative splicing isoforms for
ADAM20P1

Expression for ADAM20P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ADAM20P1 Gene

mRNA differential expression in normal tissues according to GTEx for ADAM20P1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x6.9), Brain - Cerebellum (x6.0), and Testis (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of ADAM20P1 Gene:

ADAM20P1

SOURCE GeneReport for Unigene cluster for ADAM20P1 Gene:

Hs.188369
genes like me logo Genes that share expression patterns with ADAM20P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADAM20P1 Gene

Orthologs for ADAM20P1 Gene

Evolution for ADAM20P1 Gene

ENSEMBL:
Gene Tree for ADAM20P1 (if available)
TreeFam:
Gene Tree for ADAM20P1 (if available)

No data available for Orthologs for ADAM20P1 Gene

Paralogs for ADAM20P1 Gene

No data available for Paralogs for ADAM20P1 Gene

Variants for ADAM20P1 Gene

Sequence variations from dbSNP and Humsavar for ADAM20P1 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000087304 -- 70,475,498(-) G/A/C intron_variant
rs1000332000 -- 70,485,487(-) G/A upstream_transcript_variant
rs1000356547 -- 70,474,468(-) G/C intron_variant
rs1000752608 -- 70,470,637(-) T/C non_coding_transcript_variant
rs1000806144 -- 70,470,448(-) T/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ADAM20P1 Gene

Variant ID Type Subtype PubMed ID
esv3568010 CNV gain 25503493
esv3581280 CNV loss 25503493
nsv1116461 OTHER inversion 24896259
nsv983841 CNV duplication 23825009

Additional Variant Information for ADAM20P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADAM20P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ADAM20P1 Gene

Disorders for ADAM20P1 Gene

Additional Disease Information for ADAM20P1

No disorders were found for ADAM20P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADAM20P1 Gene

Publications for ADAM20P1 Gene

  1. VIRMA mediates preferential m6A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. (PMID: 29507755) Yue Y … Liu J (Cell discovery 2018) 3 56
  2. The identification of seven metalloproteinase-disintegrin (ADAM) genes from genomic libraries. (PMID: 10524237) Poindexter K … Cerretti DP (Gene 1999) 3 56

Products for ADAM20P1 Gene

Sources for ADAM20P1 Gene