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Aliases for ACVR2B-AS1 Gene

Subcategory (RNA class) for ACVR2B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ACVR2B-AS1 Gene

  • ACVR2B Antisense RNA 1 2 3 5
  • ACVR2B Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for ACVR2B-AS1 Gene

Summaries for ACVR2B-AS1 Gene

GeneCards Summary for ACVR2B-AS1 Gene

ACVR2B-AS1 (ACVR2B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ACVR2B-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACVR2B-AS1 Gene

Genomics for ACVR2B-AS1 Gene

GeneHancer (GH) Regulatory Elements for ACVR2B-AS1 Gene

Promoters and enhancers for ACVR2B-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J038452 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 650.7 +0.0 47 4 PKNOX1 CLOCK FOXA2 ARID4B SIN3A FEZF1 YY1 E2F8 PAF1 SP3 ACVR2B ACVR2B-AS1 EXOG WDR48 XYLB
GH03J038163 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.3 +287.6 287622 8 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 OXSR1 LOC101928234 GORASP1 C3orf35 ACAA1 MYD88 SLC22A13 ACVR2B-AS1 VILL PLCD1
GH03J039145 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 9.9 -696.3 -696277 10.7 CLOCK FEZF1 DMAP1 IRF4 YY1 E2F8 ZNF143 ZNF263 SP3 MEF2D CSRNP1 ENSG00000283849 LOC101928263 GORASP1 SNORA62 TTC21A CX3CR1 OXSR1 WDR48 XIRP1
GH03J038457 Enhancer 0.9 Ensembl ENCODE 0.7 -4.9 -4869 4.3 ZNF133 MAX ZIC2 RFX5 YY1 ZFHX2 POLR2A EGR1 SCRT2 EGR2 EXOG RNU6-1227P ACVR2B-AS1 ACVR2B GC03P038491
GH03J038458 Enhancer 0.6 ENCODE 0.7 -2.6 -2625 0.2 PKNOX1 ZNF133 MAFG GABPA ZNF148 MITF ZNF316 IKZF1 MAFK ACVR2B ACVR2B-AS1 GC03P038491
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ACVR2B-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ACVR2B-AS1 Gene

Genomic Locations for ACVR2B-AS1 Gene
chr3:38,451,027-38,454,820
(GRCh38/hg38)
Size:
3,794 bases
Orientation:
Minus strand
chr3:38,492,518-38,496,311
(GRCh37/hg19)
Size:
3,794 bases
Orientation:
Minus strand

Genomic View for ACVR2B-AS1 Gene

Genes around ACVR2B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACVR2B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACVR2B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACVR2B-AS1 Gene

Proteins for ACVR2B-AS1 Gene

Post-translational modifications for ACVR2B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACVR2B-AS1 Gene

Domains & Families for ACVR2B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ACVR2B-AS1 Gene

Function for ACVR2B-AS1 Gene

Phenotypes From GWAS Catalog for ACVR2B-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACVR2B-AS1 Gene

Localization for ACVR2B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACVR2B-AS1 Gene

Pathways & Interactions for ACVR2B-AS1 Gene

SuperPathways for ACVR2B-AS1 Gene

No Data Available

Interacting Proteins for ACVR2B-AS1 Gene

Gene Ontology (GO) - Biological Process for ACVR2B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ACVR2B-AS1 Gene

Drugs & Compounds for ACVR2B-AS1 Gene

No Compound Related Data Available

Transcripts for ACVR2B-AS1 Gene

mRNA/cDNA for ACVR2B-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Unigene Clusters for ACVR2B-AS1 Gene

ACVR2B antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ACVR2B-AS1 Gene

No ASD Table

Relevant External Links for ACVR2B-AS1 Gene

GeneLoc Exon Structure for
ACVR2B-AS1
ECgene alternative splicing isoforms for
ACVR2B-AS1

Expression for ACVR2B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ACVR2B-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ACVR2B-AS1 Gene

This gene is overexpressed in Muscle - Skeletal (x6.8).

SOURCE GeneReport for Unigene cluster for ACVR2B-AS1 Gene:

Hs.570596
genes like me logo Genes that share expression patterns with ACVR2B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACVR2B-AS1 Gene

Orthologs for ACVR2B-AS1 Gene

Evolution for ACVR2B-AS1 Gene

ENSEMBL:
Gene Tree for ACVR2B-AS1 (if available)
TreeFam:
Gene Tree for ACVR2B-AS1 (if available)

No data available for Orthologs for ACVR2B-AS1 Gene

Paralogs for ACVR2B-AS1 Gene

No data available for Paralogs for ACVR2B-AS1 Gene

Variants for ACVR2B-AS1 Gene

Sequence variations from dbSNP and Humsavar for ACVR2B-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000032827 -- 38,455,444(-) C/T upstream_transcript_variant
rs1000489390 -- 38,455,691(-) C/T upstream_transcript_variant
rs1000739674 -- 38,454,067(-) C/T intron_variant
rs1000760378 -- 38,453,667(-) T/C intron_variant
rs1001083923 -- 38,454,610(-) C/T non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ACVR2B-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1073218 CNV deletion 25765185
nsv1144986 CNV deletion 24896259
nsv954465 CNV deletion 24416366

Additional Variant Information for ACVR2B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACVR2B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ACVR2B-AS1 Gene

Disorders for ACVR2B-AS1 Gene

Additional Disease Information for ACVR2B-AS1

No disorders were found for ACVR2B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ACVR2B-AS1 Gene

Publications for ACVR2B-AS1 Gene

No publications were found for ACVR2B-AS1 Gene.

Products for ACVR2B-AS1 Gene

Sources for ACVR2B-AS1 Gene

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