Aliases for ACVR2B-AS1 Gene

Subcategory (RNA class) for ACVR2B-AS1 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ACVR2B-AS1 Gene

  • ACVR2B Antisense RNA 1 2 3 5
  • ACVR2B Antisense RNA 1 (Non-Protein Coding) 2 3
  • ACVR2B-AS1 2 170
  • NONHSAG034796 94

External Ids for ACVR2B-AS1 Gene

Summaries for ACVR2B-AS1 Gene

GeneCards Summary for ACVR2B-AS1 Gene

ACVR2B-AS1 (ACVR2B Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with ACVR2B-AS1 include Heterotaxy, Visceral, 4, Autosomal.

Additional gene information for ACVR2B-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ACVR2B-AS1 Gene

Genomics for ACVR2B-AS1 Gene

GeneHancer (GH) Regulatory Elements for ACVR2B-AS1 Gene

Promoters and enhancers for ACVR2B-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ACVR2B-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ACVR2B-AS1 Gene

Genomic Locations for ACVR2B-AS1 Gene
chr3:38,444,886-38,455,452
(GRCh38/hg38)
Size:
10,567 bases
Orientation:
Minus strand
chr3:38,492,518-38,496,311
(GRCh37/hg19)
Size:
3,794 bases
Orientation:
Minus strand

Genomic View for ACVR2B-AS1 Gene

Genes around ACVR2B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACVR2B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACVR2B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACVR2B-AS1 Gene

Proteins for ACVR2B-AS1 Gene

Post-translational modifications for ACVR2B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACVR2B-AS1 Gene

Domains & Families for ACVR2B-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ACVR2B-AS1 Gene

Function for ACVR2B-AS1 Gene

Phenotypes From GWAS Catalog for ACVR2B-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACVR2B-AS1 Gene

Localization for ACVR2B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACVR2B-AS1 Gene

Pathways & Interactions for ACVR2B-AS1 Gene

PathCards logo

SuperPathways for ACVR2B-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ACVR2B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ACVR2B-AS1 Gene

Drugs & Compounds for ACVR2B-AS1 Gene

No Compound Related Data Available

Transcripts for ACVR2B-AS1 Gene

mRNA/cDNA for ACVR2B-AS1 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNACentral transcripts :
(3) LNCipedia transcripts :
(2) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ACVR2B-AS1 Gene

No ASD Table

Relevant External Links for ACVR2B-AS1 Gene

GeneLoc Exon Structure for
ACVR2B-AS1
ECgene alternative splicing isoforms for
ACVR2B-AS1

Expression for ACVR2B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ACVR2B-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ACVR2B-AS1 Gene

This gene is overexpressed in Muscle - Skeletal (x6.8).

SOURCE GeneReport for Unigene cluster for ACVR2B-AS1 Gene:

Hs.570596
genes like me logo Genes that share expression patterns with ACVR2B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACVR2B-AS1 Gene

Orthologs for ACVR2B-AS1 Gene

Evolution for ACVR2B-AS1 Gene

ENSEMBL:
Gene Tree for ACVR2B-AS1 (if available)
TreeFam:
Gene Tree for ACVR2B-AS1 (if available)

No data available for Orthologs for ACVR2B-AS1 Gene

Paralogs for ACVR2B-AS1 Gene

No data available for Paralogs for ACVR2B-AS1 Gene

Variants for ACVR2B-AS1 Gene

Sequence variations from dbSNP and Humsavar for ACVR2B-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1559642966 uncertain-significance, Heterotaxy, visceral, 4, autosomal 38,454,323(-) A/G intron_variant
rs1000032827 -- 38,455,444(-) C/T upstream_transcript_variant
rs1000489390 -- 38,455,691(-) C/A/G/T upstream_transcript_variant
rs1000739674 -- 38,454,067(-) C/T intron_variant
rs1000760378 -- 38,453,667(-) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ACVR2B-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1073218 CNV deletion 25765185
nsv1144986 CNV deletion 24896259
nsv954465 CNV deletion 24416366

Additional Variant Information for ACVR2B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACVR2B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ACVR2B-AS1 Gene

Disorders for ACVR2B-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ACVR2B-AS1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
heterotaxy, visceral, 4, autosomal
  • htx4
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for ACVR2B-AS1

genes like me logo Genes that share disorders with ACVR2B-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ACVR2B-AS1 Gene

Publications for ACVR2B-AS1 Gene

No publications were found for ACVR2B-AS1 Gene.

Products for ACVR2B-AS1 Gene

Sources for ACVR2B-AS1 Gene