Aliases for ACTP1 Gene

Aliases for ACTP1 Gene

  • Actin Family Pseudogene 1 2 3 5
  • ACTP1 5

External Ids for ACTP1 Gene

Previous GeneCards Identifiers for ACTP1 Gene

  • GC00U936414

Summaries for ACTP1 Gene

GeneCards Summary for ACTP1 Gene

ACTP1 (Actin Family Pseudogene 1) is a Pseudogene.

Additional gene information for ACTP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ACTP1 Gene

Genomics for ACTP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ACTP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J108106 Enhancer 0.3 Ensembl 0.4 +7.8 7788 0.6 SMARCA4 NANOG lnc-SLC5A7-1 ACTP1 SLC5A7 SULT1C3
GH02J108074 Enhancer 0.4 Ensembl 0.4 -24.2 -24210 1 POLR2A SMARCA4 GATA2 LINC01594 LINC01593 ACTP1 SLC5A7 SULT1C3
GH02J108107 Enhancer 0.3 Ensembl 0.4 +8.3 8291 0.4 ZNF547 LINC01594 lnc-SLC5A7-1 ACTP1 SLC5A7 SULT1C3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ACTP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ACTP1 Gene

Genomic Locations for ACTP1 Gene
chr2:108,099,110-108,099,492
(GRCh38/hg38)
Size:
383 bases
Orientation:
Plus strand
chr2:108,715,566-108,715,948
(GRCh37/hg19)
Size:
383 bases
Orientation:
Plus strand

Genomic View for ACTP1 Gene

Genes around ACTP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACTP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACTP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTP1 Gene

Proteins for ACTP1 Gene

No data available for DME Specific Peptides for ACTP1 Gene

Domains & Families for ACTP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ACTP1 Gene

Function for ACTP1 Gene

Phenotypes From GWAS Catalog for ACTP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACTP1 Gene

Localization for ACTP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACTP1 Gene

Pathways & Interactions for ACTP1 Gene

PathCards logo

SuperPathways for ACTP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ACTP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ACTP1 Gene

Drugs & Compounds for ACTP1 Gene

No Compound Related Data Available

Transcripts for ACTP1 Gene

mRNA/cDNA for ACTP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ACTP1 Gene

No ASD Table

Relevant External Links for ACTP1 Gene

GeneLoc Exon Structure for
ACTP1

Expression for ACTP1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACTP1 Gene

Orthologs for ACTP1 Gene

Evolution for ACTP1 Gene

ENSEMBL:
Gene Tree for ACTP1 (if available)
TreeFam:
Gene Tree for ACTP1 (if available)

No data available for Orthologs for ACTP1 Gene

Paralogs for ACTP1 Gene

No data available for Paralogs for ACTP1 Gene

Variants for ACTP1 Gene

Additional Variant Information for ACTP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACTP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACTP1 Gene

Disorders for ACTP1 Gene

No disorders were found for ACTP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ACTP1 Gene

Publications for ACTP1 Gene

No publications were found for ACTP1 Gene.

Products for ACTP1 Gene

Sources for ACTP1 Gene