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Aliases for ACTG1P3 Gene

Aliases for ACTG1P3 Gene

  • Actin Gamma 1 Pseudogene 3 2 3 5
  • Actin, Gamma Pseudogene 3 2 3
  • DJ545L17.4 3
  • ACTGP3 3

External Ids for ACTG1P3 Gene

Previous HGNC Symbols for ACTG1P3 Gene

  • ACTGP3

Previous GeneCards Identifiers for ACTG1P3 Gene

  • GC20P001093
  • GC20P001142
  • GC20P001143
  • GC20P001144
  • GC20P001145

Summaries for ACTG1P3 Gene

GeneCards Summary for ACTG1P3 Gene

ACTG1P3 (Actin Gamma 1 Pseudogene 3) is a Pseudogene.

Additional gene information for ACTG1P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACTG1P3 Gene

Genomics for ACTG1P3 Gene

GeneHancer (GH) Regulatory Elements for ACTG1P3 Gene

Promoters and enhancers for ACTG1P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J001185 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE 33.4 +26.4 26375 3.8 HDGF ARNT ARID4B YBX1 DMAP1 YY1 SLC30A9 POLR2B CBX5 E2F8 TMEM74B ENSG00000274269 LOC105372496 TBC1D20 ACTG1P3 RBCK1 ENSG00000229728 SDCBP2-AS1 PSMF1
GH20J000323 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 29.6 -834.0 -834002 7 CLOCK MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC C20orf96 SOX12 TBC1D20 ACTG1P3 DEFB129 ENSG00000272874 DEFB126 DEFB125 ZCCHC3 NRSN2
GH20J000541 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 29.4 -617.2 -617163 2.9 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLR2B CSNK2A1 ACTG1P3 TBC1D20 RBCK1 PIR56447 GC20M000487 GC20M000488
GH20J000345 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 32.9 -812.8 -812823 3.7 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 MCM3 LOC101929937 GC20M000344 NRSN2 NRSN2-AS1 ACTG1P3 TBC1D20 ENSG00000272874 DEFB129 DEFB126 DEFB125
GH20J001893 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 20.6 +735.8 735799 6 PKNOX1 SIN3A IRF4 ZNF48 YY1 GLIS2 ZNF143 RUNX3 SP3 RXRA SIRPA ENSG00000276649 ZNF343 ACTG1P3 VPS16 SNRPB NOP56 SIRPB2 SIRPB1 PDYN-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ACTG1P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ACTG1P3 Gene

Genomic Locations for ACTG1P3 Gene
chr20:1,160,509-1,162,097
(GRCh38/hg38)
Size:
1,589 bases
Orientation:
Plus strand
chr20:1,141,154-1,142,641
(GRCh37/hg19)
Size:
1,488 bases
Orientation:
Plus strand

Genomic View for ACTG1P3 Gene

Genes around ACTG1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACTG1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACTG1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTG1P3 Gene

Function for ACTG1P3 Gene

Phenotypes From GWAS Catalog for ACTG1P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACTG1P3 Gene

Localization for ACTG1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACTG1P3 Gene

Pathways & Interactions for ACTG1P3 Gene

SuperPathways for ACTG1P3 Gene

No Data Available

Interacting Proteins for ACTG1P3 Gene

Gene Ontology (GO) - Biological Process for ACTG1P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ACTG1P3 Gene

Drugs & Compounds for ACTG1P3 Gene

No Compound Related Data Available

Transcripts for ACTG1P3 Gene

mRNA/cDNA for ACTG1P3 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ACTG1P3 Gene

No ASD Table

Relevant External Links for ACTG1P3 Gene

GeneLoc Exon Structure for
ACTG1P3
ECgene alternative splicing isoforms for
ACTG1P3

Expression for ACTG1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ACTG1P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of ACTG1P3 Gene:

ACTG1P3
genes like me logo Genes that share expression patterns with ACTG1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACTG1P3 Gene

Orthologs for ACTG1P3 Gene

Evolution for ACTG1P3 Gene

ENSEMBL:
Gene Tree for ACTG1P3 (if available)
TreeFam:
Gene Tree for ACTG1P3 (if available)

No data available for Orthologs for ACTG1P3 Gene

Paralogs for ACTG1P3 Gene

No data available for Paralogs for ACTG1P3 Gene

Variants for ACTG1P3 Gene

Additional Variant Information for ACTG1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACTG1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACTG1P3 Gene

Disorders for ACTG1P3 Gene

No disorders were found for ACTG1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ACTG1P3 Gene

Publications for ACTG1P3 Gene

  1. FISH localization of human cytoplasmic actin genes ACTB to 7p22 and ACTG1 to 17q25 and characterization of related pseudogenes. (PMID: 8941379) Ueyama H … Miwa T (Cytogenetics and cell genetics 1996) 2 3 58
  2. Estimate of the mutation rate per nucleotide in humans. (PMID: 10978293) Nachman MW … Crowell SL (Genetics 2000) 3 58
  3. Structure of a processed gene of human cytoplasmic gamma-actin. (PMID: 3748813) Leube R … Gallwitz D (Nucleic acids research 1986) 3 58

Products for ACTG1P3 Gene

Sources for ACTG1P3 Gene

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