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Aliases for ACTBP2 Gene

Aliases for ACTBP2 Gene

  • Actin, Beta Pseudogene 2 2 3 5

External Ids for ACTBP2 Gene

Previous GeneCards Identifiers for ACTBP2 Gene

  • GC05U990001
  • GC05P077164
  • GC05P077116

Summaries for ACTBP2 Gene

GeneCards Summary for ACTBP2 Gene

ACTBP2 (Actin, Beta Pseudogene 2) is a Pseudogene.

Additional gene information for ACTBP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACTBP2 Gene

Genomics for ACTBP2 Gene

GeneHancer (GH) Regulatory Elements for ACTBP2 Gene

Promoters and enhancers for ACTBP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I077784 Promoter 0.5 Ensembl 550.8 +0.2 198 0.4 ACTBP2 TBCA GC05P077817
GH05I077777 Enhancer 0.6 ENCODE 0.4 -7.1 -7111 0.2 SAP130 JUND ATF3 SCRT2 PRDM10 ZBTB33 FOS FOSL2 HNF4A LOC105379045 TBCA OTP ACTBP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ACTBP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ACTBP2 Gene

Genomic Locations for ACTBP2 Gene
chr5:77,784,803-77,786,597
(GRCh38/hg38)
Size:
1,795 bases
Orientation:
Plus strand
chr5:77,080,627-77,082,421
(GRCh37/hg19)

Genomic View for ACTBP2 Gene

Genes around ACTBP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACTBP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACTBP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTBP2 Gene

Proteins for ACTBP2 Gene

Post-translational modifications for ACTBP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACTBP2 Gene

Domains & Families for ACTBP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ACTBP2 Gene

Function for ACTBP2 Gene

Molecular function for ACTBP2 Gene

GENATLAS Biochemistry:
actin,beta,pseudogene 2

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACTBP2 Gene

Localization for ACTBP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACTBP2 Gene

Pathways & Interactions for ACTBP2 Gene

SuperPathways for ACTBP2 Gene

No Data Available

Interacting Proteins for ACTBP2 Gene

Gene Ontology (GO) - Biological Process for ACTBP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ACTBP2 Gene

Drugs & Compounds for ACTBP2 Gene

No Compound Related Data Available

Transcripts for ACTBP2 Gene

mRNA/cDNA for ACTBP2 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ACTBP2 Gene

No ASD Table

Relevant External Links for ACTBP2 Gene

GeneLoc Exon Structure for
ACTBP2
ECgene alternative splicing isoforms for
ACTBP2

Expression for ACTBP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ACTBP2 Gene

mRNA differential expression in normal tissues according to GTEx for ACTBP2 Gene

This gene is overexpressed in Whole Blood (x6.5).

NURSA nuclear receptor signaling pathways regulating expression of ACTBP2 Gene:

ACTBP2
genes like me logo Genes that share expression patterns with ACTBP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACTBP2 Gene

Orthologs for ACTBP2 Gene

Evolution for ACTBP2 Gene

ENSEMBL:
Gene Tree for ACTBP2 (if available)
TreeFam:
Gene Tree for ACTBP2 (if available)

No data available for Orthologs for ACTBP2 Gene

Paralogs for ACTBP2 Gene

No data available for Paralogs for ACTBP2 Gene

Variants for ACTBP2 Gene

Additional Variant Information for ACTBP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACTBP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACTBP2 Gene

Disorders for ACTBP2 Gene

Additional Disease Information for ACTBP2

Genetic Association Database
(GAD)

No disorders were found for ACTBP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ACTBP2 Gene

Publications for ACTBP2 Gene

  1. Evolution of the functional human beta-actin gene and its multi-pseudogene family: conservation of noncoding regions and chromosomal dispersion of pseudogenes. (PMID: 3837182) Ng SY … Kedes L (Molecular and cellular biology 1985) 2 3 58
  2. [Polymorphism in the SE33 locus in the Polish population]. (PMID: 23650840) Reichert M … Pawłowski R (Archiwum medycyny sadowej i kryminologii 2012) 3 58
  3. Genome-wide detection of allele specific copy number variation associated with insulin resistance in African Americans from the HyperGEN study. (PMID: 21901158) Irvin MR … Arnett DK (PloS one 2011) 44 58
  4. Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data. (PMID: 17362836) Schymick JC … Traynor BJ (The Lancet. Neurology 2007) 44 58
  5. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58

Products for ACTBP2 Gene

Sources for ACTBP2 Gene

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