Aliases for ACTBP13 Gene

Aliases for ACTBP13 Gene

  • ACTB Pseudogene 13 2 3 5
  • Actin, Beta Pseudogene 13 2 3

External Ids for ACTBP13 Gene

Previous GeneCards Identifiers for ACTBP13 Gene

  • GC03M049912
  • GC03M049914
  • GC03M049881

Summaries for ACTBP13 Gene

GeneCards Summary for ACTBP13 Gene

ACTBP13 (ACTB Pseudogene 13) is a Pseudogene.

Additional gene information for ACTBP13 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ACTBP13 Gene

Genomics for ACTBP13 Gene

GeneHancer (GH) Regulatory Elements for ACTBP13 Gene

Promoters and enhancers for ACTBP13 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J049877 Enhancer 0.3 Ensembl 500.7 -0.5 -495 0.4 ZIC2 POLR2A ACTBP13 lnc-CAMKV-1 piR-52079-141
GH03J049875 Enhancer 0.2 Ensembl 500.7 +1.2 1205 0.6 ACTBP13 lnc-CAMKV-1 CDHR4 CAMKV
GH03J049872 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.7 +4.1 4075 2.4 EP300 KDM6A RFX1 ZBTB26 ZSCAN9 MXI1 SAP130 ZNF205 GABPB1 MXD4 RBM6 ZMYND10 GNAI2 HYAL3 CAMKV ACTBP13
GH03J049871 Enhancer 0.5 Ensembl 0.4 +5.6 5605 0.6 MNT MAX BHLHE40 PRDM4 MLX SOX5 AHR CAMKV lnc-TRAIP-2 ACTBP13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ACTBP13 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ACTBP13 Gene

Genomic Locations for ACTBP13 Gene
chr3:49,873,345-49,877,306
(GRCh38/hg38)
Size:
3,962 bases
Orientation:
Minus strand
chr3:49,910,778-49,915,413
(GRCh37/hg19)
Size:
4,636 bases
Orientation:
Minus strand

Genomic View for ACTBP13 Gene

Genes around ACTBP13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACTBP13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACTBP13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTBP13 Gene

Proteins for ACTBP13 Gene

Post-translational modifications for ACTBP13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACTBP13 Gene

Domains & Families for ACTBP13 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ACTBP13 Gene

Function for ACTBP13 Gene

Phenotypes From GWAS Catalog for ACTBP13 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACTBP13 Gene

Localization for ACTBP13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACTBP13 Gene

Pathways & Interactions for ACTBP13 Gene

PathCards logo

SuperPathways for ACTBP13 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ACTBP13 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ACTBP13 Gene

Drugs & Compounds for ACTBP13 Gene

No Compound Related Data Available

Transcripts for ACTBP13 Gene

mRNA/cDNA for ACTBP13 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ACTBP13 Gene

No ASD Table

Relevant External Links for ACTBP13 Gene

GeneLoc Exon Structure for
ACTBP13

Expression for ACTBP13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ACTBP13 Gene

mRNA differential expression in normal tissues according to GTEx for ACTBP13 Gene

This gene is overexpressed in Testis (x38.9).
genes like me logo Genes that share expression patterns with ACTBP13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACTBP13 Gene

Orthologs for ACTBP13 Gene

Evolution for ACTBP13 Gene

ENSEMBL:
Gene Tree for ACTBP13 (if available)
TreeFam:
Gene Tree for ACTBP13 (if available)

No data available for Orthologs for ACTBP13 Gene

Paralogs for ACTBP13 Gene

No data available for Paralogs for ACTBP13 Gene

Variants for ACTBP13 Gene

Additional Variant Information for ACTBP13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACTBP13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACTBP13 Gene

Disorders for ACTBP13 Gene

No disorders were found for ACTBP13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ACTBP13 Gene

Publications for ACTBP13 Gene

No publications were found for ACTBP13 Gene.

Products for ACTBP13 Gene

Sources for ACTBP13 Gene