Aliases for ACTBP12 Gene

Aliases for ACTBP12 Gene

  • ACTB Pseudogene 12 2 3 5
  • Actin, Beta Pseudogene 12 2 3
  • Actin, Gamma Pseudogene 5 2 3
  • ACTGP5 3

External Ids for ACTBP12 Gene

Previous HGNC Symbols for ACTBP12 Gene

  • ACTGP5

Previous GeneCards Identifiers for ACTBP12 Gene

  • GC01U902393
  • GC01M092695

Summaries for ACTBP12 Gene

GeneCards Summary for ACTBP12 Gene

ACTBP12 (ACTB Pseudogene 12) is a Pseudogene.

Additional gene information for ACTBP12 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ACTBP12 Gene

Genomics for ACTBP12 Gene

GeneHancer (GH) Regulatory Elements for ACTBP12 Gene

Promoters and enhancers for ACTBP12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J092229 Promoter 0.3 EPDnew 750.6 +0.3 328 0.1 ACTBP12 C1orf146
GH01J093177 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 14.6 -950.1 -950145 6 ZNF785 SP1 ZBTB40 SIX5 FOXA1 SMARCE1 RBPJ POLR2A HDAC2 NR2F6 CCDC18 TMED5 lnc-TMED5-3 CCDC18-AS1 SNORA66 SNORD21 MTF2 RPL5 DNTTIP2 GLMN
GH01J093078 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 14.6 -851.0 -851042 4.6 ZNF785 SIN3A ZNF24 SP1 ZBTB40 CTCF ZBTB6 FOXA1 MLX RBPJ MTF2 NONHSAG002079.2 lnc-TMED5-6 CCDC18-AS1 SNORA66 SNORD21 GLMN RPL5 ENSG00000260464 DR1
GH01J092831 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 14.6 -604.1 -604101 4.5 ZNF785 SIN3A SP1 ZBTB40 CTCF SREBF1 MLX SMARCE1 RBPJ POLR2A RPL5 MTF2 SNORA66 SNORD21 CCDC18-AS1 GLMN DR1 RPAP2 KIAA1107 ENSG00000225505
GH01J091499 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 14.6 +727.9 727882 3.4 ZBTB40 CTCF SMARCE1 POLR2A ZNF362 MYC ELF1 HLF L3MBTL2 CEBPB CDC7 HFM1 SNORD3G ZNF644 ACTBP12 ENSG00000229201 ENSG00000273487 SETSIP EPHX4 GLMN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ACTBP12 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ACTBP12 Gene

Genomic Locations for ACTBP12 Gene
chr1:92,229,016-92,229,456
(GRCh38/hg38)
Size:
441 bases
Orientation:
Minus strand
chr1:92,694,138-92,695,013
(GRCh37/hg19)
Size:
876 bases
Orientation:
Minus strand

Genomic View for ACTBP12 Gene

Genes around ACTBP12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACTBP12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACTBP12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTBP12 Gene

Proteins for ACTBP12 Gene

Post-translational modifications for ACTBP12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACTBP12 Gene

Domains & Families for ACTBP12 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ACTBP12 Gene

Function for ACTBP12 Gene

Phenotypes From GWAS Catalog for ACTBP12 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACTBP12 Gene

Localization for ACTBP12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACTBP12 Gene

Pathways & Interactions for ACTBP12 Gene

PathCards logo

SuperPathways for ACTBP12 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ACTBP12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ACTBP12 Gene

Drugs & Compounds for ACTBP12 Gene

No Compound Related Data Available

Transcripts for ACTBP12 Gene

mRNA/cDNA for ACTBP12 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ACTBP12 Gene

No ASD Table

Relevant External Links for ACTBP12 Gene

GeneLoc Exon Structure for
ACTBP12
ECgene alternative splicing isoforms for
ACTBP12

Expression for ACTBP12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ACTBP12 Gene

mRNA expression in normal human tissues for ACTBP12 Gene

NURSA nuclear receptor signaling pathways regulating expression of ACTBP12 Gene:

ACTBP12
genes like me logo Genes that share expression patterns with ACTBP12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACTBP12 Gene

Orthologs for ACTBP12 Gene

Evolution for ACTBP12 Gene

ENSEMBL:
Gene Tree for ACTBP12 (if available)
TreeFam:
Gene Tree for ACTBP12 (if available)

No data available for Orthologs for ACTBP12 Gene

Paralogs for ACTBP12 Gene

No data available for Paralogs for ACTBP12 Gene

Variants for ACTBP12 Gene

Additional Variant Information for ACTBP12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACTBP12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACTBP12 Gene

Disorders for ACTBP12 Gene

No disorders were found for ACTBP12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ACTBP12 Gene

Publications for ACTBP12 Gene

  1. Retroviral and pseudogene insertion sites reveal the lineage of human salivary and pancreatic amylase genes from a single gene during primate evolution. (PMID: 1692956) Samuelson LC … Meisler MH (Molecular and cellular biology 1990) 3 56

No data available for External Links for ACTBP12 Gene

Products for ACTBP12 Gene

Sources for ACTBP12 Gene