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Aliases for ACTBP11 Gene
External Ids for ACTBP11 Gene
- HGNC: 33971
- NCBI Entrez Gene: 644220
- Ensembl: ENSG00000188460
Previous GeneCards Identifiers for ACTBP11 Gene
- GC01M222119
- GC01M224051
- GC01M194663
Summaries for ACTBP11 Gene
GeneCards Summary for ACTBP11 Gene
ACTBP11 (ACTB Pseudogene 11) is a Pseudogene.
Additional gene information for ACTBP11 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ACTBP11 Gene
Genomics for ACTBP11 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ACTBP11 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J223870 | Enhancer | 0.8 | ENCODE | 0.4 | -5.9 | -5939 | 1.4 | IKZF1 ZIC2 ZNF395 VEZF1 TAL1 NCOR1 MYNN SPI1 NCOA2 HDAC2 | HSALNG0010913 TP53BP2 SEPTIN7P13 CAPN2 GTF2IP20 ACTBP11 FBXO28 | |
| GH01J223859 | Enhancer | 0.5 | Ensembl | 0.7 | +4.7 | 4706 | 1.1 | ZNF792 TRIM28 EP300 ZBTB17 ZNF580 ZNF600 | CAPN2 GTF2IP20 ACTBP11 HSALNG0010911 PHBP11 TP53BP2 FBXO28 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ACTBP11 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for ACTBP11 Gene
Latest Assembly
- chr1:223,863,145-223,864,935
- (GRCh38/hg38)
- Size:
- 1,791 bases
- Orientation:
- Minus strand
Previous Assembly
- chr1:224,050,847-224,052,637
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 1,791 bases
- Orientation:
- Minus strand
- chr1:224,051,428-224,052,553
- (GRCh37/hg19 by Ensembl)
- Size:
- 1,126 bases
- Orientation:
- Minus strand
Genomic View for ACTBP11 Gene
Genes around ACTBP11 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1q41 by HGNC
- 1q41 by Entrez Gene
- 1q41 by Ensembl
ACTBP11 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ACTBP11 Gene
Proteins for ACTBP11 Gene
Post-translational modifications for ACTBP11 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ACTBP11
- Origene Custom Protein Services for ACTBP11
Assay products for research
No data available for DME Specific Peptides for ACTBP11 Gene
Domains & Families for ACTBP11 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ACTBP11 Gene
Function for ACTBP11 Gene
Phenotypes From GWAS Catalog for ACTBP11 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ACTBP11 - Starting at $85 >
- * ACTBP11 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for ACTBP11
miRNA products for research
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for ACTBP11 - Starting at $45 >
- * ACTBP11 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACTBP11 Gene
Localization for ACTBP11 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACTBP11 Gene
Transcripts for ACTBP11 Gene
mRNA/cDNA for ACTBP11 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000436287 1126 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ACTBP11 - Starting at $85 >
- * ACTBP11 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for ACTBP11
miRNA products for research
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for ACTBP11 - Starting at $45 >
- * ACTBP11 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Relevant External Links for ACTBP11 Gene
- GeneLoc Exon Structure for
- ACTBP11
Expression for ACTBP11 Gene
mRNA differential expression in normal tissues according to GTEx for ACTBP11 Gene
This gene is overexpressed in Esophagus - Mucosa (x17.6), Vagina (x16.6), and Cervix - Ectocervix (x8.0).
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACTBP11 Gene
Orthologs for ACTBP11 Gene
No data available for Orthologs for ACTBP11 Gene
Paralogs for ACTBP11 Gene
No data available for Paralogs for ACTBP11 Gene
Variants for ACTBP11 Gene
Additional Variant Information for ACTBP11 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ACTBP11
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACTBP11 Gene
Disorders for ACTBP11 Gene
No disorders were found for ACTBP11 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ACTBP11 Gene
Publications for ACTBP11 Gene
No publications were found for ACTBP11 Gene.
ExternalLinks
Products for ACTBP11 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ACTBP11
- Origene Custom Protein Services for ACTBP11
- Browse OriGene Inhibitory RNA Products For ACTBP11
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ACTBP11
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ACTBP11
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ACTBP11
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ACTBP11
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ACTBP11
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ACTBP11
Sources for ACTBP11 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB