Aliases for ACSM5P1 Gene

Aliases for ACSM5P1 Gene

  • Acyl-CoA Synthetase Medium Chain Family Member 5 Pseudogene 1 2 3 5
  • ACSM5P1 5

External Ids for ACSM5P1 Gene

Summaries for ACSM5P1 Gene

GeneCards Summary for ACSM5P1 Gene

ACSM5P1 (Acyl-CoA Synthetase Medium Chain Family Member 5 Pseudogene 1) is a Pseudogene.

Additional gene information for ACSM5P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ACSM5P1 Gene

Genomics for ACSM5P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ACSM5P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J020596 Enhancer 0.9 ENCODE 0.4 +8.8 8847 2.9 GATAD2A ATF7 REST TFE3 NFKBIZ RCOR2 RXRB IRF2 SP1 GABPA LOC112267906 ACSM1 REXO5 ACSM5P1 ACSM3 ACSM2B
GH16J020587 Enhancer 0.6 Ensembl ENCODE 0.4 +19.3 19268 1.8 SP1 RAD21 HNF4A RXRA ACSM1 ACSM5 REXO5 piR-44560-002 ENSG00000260201 LOC112267906 ACSM2B ACSM5P1 ACSM3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ACSM5P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ACSM5P1 Gene

Genomic Locations for ACSM5P1 Gene
chr16:20,586,550-20,607,169
(GRCh38/hg38)
Size:
20,620 bases
Orientation:
Minus strand
chr16:20,597,872-20,618,429
(GRCh37/hg19)
Size:
20,558 bases
Orientation:
Minus strand

Genomic View for ACSM5P1 Gene

Genes around ACSM5P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACSM5P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACSM5P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACSM5P1 Gene

Proteins for ACSM5P1 Gene

Post-translational modifications for ACSM5P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACSM5P1 Gene

Domains & Families for ACSM5P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ACSM5P1 Gene

Function for ACSM5P1 Gene

Phenotypes From GWAS Catalog for ACSM5P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACSM5P1 Gene

Localization for ACSM5P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACSM5P1 Gene

Pathways & Interactions for ACSM5P1 Gene

PathCards logo

SuperPathways for ACSM5P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ACSM5P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ACSM5P1 Gene

Drugs & Compounds for ACSM5P1 Gene

No Compound Related Data Available

Transcripts for ACSM5P1 Gene

mRNA/cDNA for ACSM5P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ACSM5P1 Gene

No ASD Table

Relevant External Links for ACSM5P1 Gene

GeneLoc Exon Structure for
ACSM5P1

Expression for ACSM5P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ACSM5P1 Gene

genes like me logo Genes that share expression patterns with ACSM5P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACSM5P1 Gene

Orthologs for ACSM5P1 Gene

Evolution for ACSM5P1 Gene

ENSEMBL:
Gene Tree for ACSM5P1 (if available)
TreeFam:
Gene Tree for ACSM5P1 (if available)

No data available for Orthologs for ACSM5P1 Gene

Paralogs for ACSM5P1 Gene

No data available for Paralogs for ACSM5P1 Gene

Variants for ACSM5P1 Gene

Additional Variant Information for ACSM5P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACSM5P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACSM5P1 Gene

Disorders for ACSM5P1 Gene

No disorders were found for ACSM5P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ACSM5P1 Gene

Publications for ACSM5P1 Gene

No publications were found for ACSM5P1 Gene.

Products for ACSM5P1 Gene

Sources for ACSM5P1 Gene